RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 PRAMEF10O60809 474 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 SOCS5O75159 536 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 RNF8O76064 485 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 PEX11BO96011 259 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 FUCA1P04066 466 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 ITGB2P05107 769 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 GZMAP12544 262 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 CCNB1P14635 433 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 ITIH1P19827 911 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 CR2P20023 1033 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 ETV5P41161 510 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
NLK-204ENST00000583517 ARHGEF7Q14155 803 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 NR1D2Q14995 579 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 ACOX1Q15067 660 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 CNGA3Q16281 694 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 LINC00303Q3SY05 128 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 NRROSQ86YC3 692 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 EXD3Q8N9H8 876 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 NUS1Q96E22 293 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 SGF29Q96ES7 293 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 CMKLR1Q99788 373 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 TEX101Q9BY14 249 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 ZWILCHQ9H900 591 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 SPATS2LQ9NUQ6 558 aaKnown RBP11.88□□□□□ -0.51
NLK-204ENST00000583517 FOXJ2Q9P0K8 574 aa11.88□□□□□ -0.51
NLK-204ENST00000583517 SPTA1P02549 2419 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 A0A1W2PQ67 120 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 A0A1W2PQC6 194 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 TTC24A2A3L6 582 aaPredicted RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 C9orf172C9J069 976 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 TEX33O43247 280 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 B4GAT1O43505 415 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 HEXIM1O94992 359 aaKnown RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 CPNE6O95741 557 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 FTLP02792 175 aaPredicted RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 CEACAM5P06731 702 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 KRT10P13645 584 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 VIPR1P32241 457 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 PCK1P35558 622 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 HSPA9P38646 679 aaKnown RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 DPYSL2Q16555 572 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 XKR5Q6UX68 686 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 USP53Q70EK8 1073 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 ZNF571Q7Z3V5 609 aaPredicted RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 HEATR4Q86WZ0 1026 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 DTX1Q86Y01 620 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 PGBD5Q8N414 524 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 PAF1Q8N7H5 531 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 DTD2Q96FN9 168 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 NUDCD1Q96RS6 583 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 MGME1Q9BQP7 344 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 FRMD8Q9BZ67 464 aaPredicted RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 B3GNT4Q9C0J1 378 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 SEMA6CQ9H3T2 930 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 CARS2Q9HA77 564 aaKnown RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 NOD2Q9HC29 1040 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 PHPT1Q9NRX4 125 aaPredicted RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 TRNAU1APQ9NX07 287 aaKnown RBP11.87□□□□□ -0.51
NLK-204ENST00000583517 KCTD5Q9NXV2 234 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 SEPT10Q9P0V9 454 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 PCDHGC4Q9Y5F7 938 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 ST14Q9Y5Y6 855 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 UNC13CQ8NB66 2214 aa11.87□□□□□ -0.51
NLK-204ENST00000583517 SLC28A2O43868 658 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 CPP00450 1065 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 FGF1P05230 155 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 LHCGRP22888 699 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 CD82P27701 267 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 IL1R2P27930 398 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 TEAD1P28347 426 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 ETV3P41162 512 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 PRKCIP41743 596 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 MAZP56270 477 aaKnown RBP11.86□□□□□ -0.51
NLK-204ENST00000583517 OR1D5P58170 312 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 CDK3Q00526 305 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 ILF3Q12906 894 aaKnown RBP eCLIP11.86□□□□□ -0.51
NLK-204ENST00000583517 ZNF235Q14590 738 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 C16orf72Q14CZ0 275 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 CLPPQ16740 277 aaPredicted RBP11.86□□□□□ -0.51
NLK-204ENST00000583517 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 PHF19Q5T6S3 580 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 E4F1Q66K89 784 aaPredicted RBP11.86□□□□□ -0.51
NLK-204ENST00000583517 ZNF574Q6ZN55 896 aaPredicted RBP11.86□□□□□ -0.51
NLK-204ENST00000583517 HSD11B1LQ7Z5J1 315 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 POLNQ7Z5Q5 900 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 PIM3Q86V86 326 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 ZFAND4Q86XD8 727 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
NLK-204ENST00000583517 ZDHHC1Q8WTX9 485 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
NLK-204ENST00000583517 USP7Q93009 1102 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 SCRN2Q96FV2 425 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 MCCC1Q96RQ3 725 aaPredicted RBP11.86□□□□□ -0.51
NLK-204ENST00000583517 GSDMCQ9BYG8 508 aa11.86□□□□□ -0.51
NLK-204ENST00000583517 RDH14Q9HBH5 336 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms