RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 LGMNQ99538 433 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 SEMA3CQ99985 751 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 MGME1Q9BQP7 344 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 LGR4Q9BXB1 951 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 CLPBQ9H078 707 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 RBM22Q9NW64 420 aaKnown RBP eCLIP9.74□□□□□ -0.85
TOP3A-211ENST00000581536 DTLQ9NZJ0 730 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 B4GALT6Q9UBX8 382 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 SALL4Q9UJQ4 1053 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 OR1A2Q9Y585 309 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 PCDHA13Q9Y5I0 950 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 HEY1Q9Y5J3 304 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 ALG6Q9Y672 507 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 U3KQA8 63 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 USP24Q9UPU5 2620 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 BPTFQ12830 3046 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 UNC13CQ8NB66 2214 aa9.74□□□□□ -0.85
TOP3A-211ENST00000581536 COL27A1Q8IZC6 1860 aaPredicted RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 LRRD1A4D1F6 860 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 TRABD2BA6NFA1 517 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 TMEM202A6NGA9 273 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 SOWAHDA6NJG2 315 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 RFPL3O75679 317 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 JCHAINP01591 159 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 PCCBP05166 539 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 HLA-DQB2P05538 268 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ALPIP09923 528 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 KRT10P13645 584 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 CCNB1P14635 433 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 NME1P15531 152 aaKnown RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 NOP2P46087 812 aaKnown RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 THOP1P52888 689 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 AP1S1P61966 158 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 HNRNPKP61978 463 aaKnown RBP eCLIP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 YPEL5P62699 121 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 POLR2LP62875 67 aaKnown RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ADCY2Q08462 1091 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ACOX1Q15067 660 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 SMAD1Q15797 465 aaKnown RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 DEFB133Q30KQ1 61 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 INAVAQ3KP66 663 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ENPP7Q6UWV6 458 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 MFSD7Q6UXD7 560 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 DPPA4Q7L190 304 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 HSD11B1LQ7Z5J1 315 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 TSPAN33Q86UF1 283 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ZSCAN30Q86W11 494 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 PARGQ86W56 976 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 HID1Q8IV36 788 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 RHOT2Q8IXI1 618 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 PLD5Q8N7P1 536 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 CCNYQ8ND76 341 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 DENND6BQ8NEG7 585 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ZNF548Q8NEK5 533 aaPredicted RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ARRDC2Q8TBH0 407 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 MDM1Q8TC05 714 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 NSMCE1Q8WV22 266 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 PIH1D2Q8WWB5 315 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 RFFLQ8WZ73 363 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 MAML1Q92585 1016 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 IFT43Q96FT9 208 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 TSGA13Q96PP4 275 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 ZNF670Q9BS34 389 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 CEP41Q9BYV8 373 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 MRPL40Q9NQ50 206 aaKnown RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 SAE1Q9UBE0 346 aaPredicted RBP9.73□□□□□ -0.85
TOP3A-211ENST00000581536 INTUQ9ULD6 942 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 PHTF1Q9UMS5 762 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 CHKBQ9Y259 395 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 RAI2Q9Y5P3 530 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 DUSP10Q9Y6W6 482 aa9.73□□□□□ -0.85
TOP3A-211ENST00000581536 NPIPB15A6NHN6 443 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 KCNK1O00180 336 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 YY2O15391 372 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 AQP9O43315 295 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 FZD6O60353 706 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 PGLSO95336 258 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 LCA5LO95447 670 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 CPP00450 1065 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 PRLP01236 227 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 FUCA1P04066 466 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 MMP2P08253 660 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 ELFN1P0C7U0 828 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 SNRPBP14678 240 aaKnown RBP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 JUPP14923 745 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 TSHRP16473 764 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 LHCGRP22888 699 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 ACP1P24666 158 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 HNF1BP35680 557 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 DYNLT1P63172 113 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 INSM1Q01101 510 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 TARDBPQ13148 414 aaKnown RBP eCLIP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 PTK2BQ14289 1009 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 CNGA3Q16281 694 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 ALG11Q2TAA5 492 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 PNCKQ6P2M8 343 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms