RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 PCGF5Q86SE9 256 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 LINC00523Q86TU6 105 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 HOOK3Q86VS8 718 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 IPMKQ8NFU5 416 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 PIH1D2Q8WWB5 315 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ADAMTS14Q8WXS8 1223 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ARRDC3Q96B67 414 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 IFT43Q96FT9 208 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 SPACA7Q96KW9 195 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 MCCC1Q96RQ3 725 aaPredicted RBP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 SRPK1Q96SB4 655 aaKnown RBP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ERP44Q9BS26 406 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ARNT2Q9HBZ2 717 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 FBXL12Q9NXK8 326 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 UBP1Q9NZI7 540 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 PHTF1Q9UMS5 762 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 PCDHB9Q9Y5E1 797 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 PTPRBP23467 1997 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 A0A0J9YYE9 177 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 AP3B1O00203 1094 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 DNALI1O14645 258 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SEC31AO94979 1220 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 TRBC1P01850 177 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 APRTP07741 180 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 ATXN1LP0C7T5 689 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 TIMP2P16035 220 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 OXTRP30559 389 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 VPS41P49754 854 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 TPMTP51580 245 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 METAP1P53582 386 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 DRG2P55039 364 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 BASP1P80723 227 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 ELP6Q0PNE2 266 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 CNTN1Q12860 1018 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 MORF4L2Q15014 288 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SLC1A5Q15758 541 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 PCSK7Q16549 785 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 FAM182AQ5T1J6 154 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 FAXCQ5TGI0 409 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 USP45Q70EL2 814 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SLCO6A1Q86UG4 719 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 ZSWIM9Q86XI8 627 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 PPIL6Q8IXY8 311 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 PGBD3Q8N328 593 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 BBOF1Q8ND07 529 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 PDCD6IPQ8WUM4 868 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SEC14L1Q92503 715 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SCRN2Q96FV2 425 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SNF8Q96H20 258 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 LYSMD1Q96S90 227 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 OMDQ99983 421 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 TBL1YQ9BQ87 522 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 TRIM51Q9BSJ1 452 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SLC6A17Q9H1V8 727 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SGK2Q9HBY8 427 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 TPX2Q9ULW0 747 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 SHOC2Q9UQ13 582 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 CHKBQ9Y259 395 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 NCKAP1Q9Y2A7 1128 aa12.18□□□□□ -0.46
CCDC84-209ENST00000580556 UTP11Q9Y3A2 253 aaKnown RBP12.18□□□□□ -0.46
CCDC84-209ENST00000580556 URB1O60287 2271 aaKnown RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 A0A1W2PP55 124 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 CAPN8A6NHC0 703 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 EFCAB8A8MWE9 144 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 ANKRD66B4E2M5 251 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 F5H423 210 aaPredicted RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 AREL1O15033 823 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 PLRG1O43660 514 aaKnown RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 RNASEH2AO75792 299 aaKnown RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 SLU7O95391 586 aaKnown RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 PDHA1P08559 390 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 MMP12P39900 470 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 LMAN1P49257 510 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 EPHB1P54762 984 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 RPL6Q02878 288 aaKnown RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 QPCTQ16769 361 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 SIRPB2Q5JXA9 342 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 RNASEH2BQ5TBB1 312 aaKnown RBP12.17□□□□□ -0.46
CCDC84-209ENST00000580556 ARMC3Q5W041 872 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 DUPD1Q68J44 220 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 ERAP2Q6P179 960 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 NEK5Q6P3R8 708 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 FBXL19Q6PCT2 694 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 CACUL1Q86Y37 369 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 SLC41A1Q8IVJ1 513 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 PAF1Q8N7H5 531 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 NAT8LQ8N9F0 302 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 MCUQ8NE86 351 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 LPCAT1Q8NF37 534 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 CPT1BQ92523 772 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 ERLEC1Q96DZ1 483 aa12.17□□□□□ -0.46
CCDC84-209ENST00000580556 LRRC1Q9BTT6 524 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms