RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 EDEM2Q9BV94 578 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 FICDQ9BVA6 458 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 DDX47Q9H0S4 455 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 SLC25A51Q9H1U9 297 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 VIPAS39Q9H9C1 493 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 DKK3Q9UBP4 350 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 PCYOX1Q9UHG3 505 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 SHOC2Q9UQ13 582 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 EFR3BQ9Y2G0 817 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 FNDC3AQ9Y2H6 1198 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 KNL1Q8NG31 2342 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 A0A0J9YYE9 177 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CCDC78A2IDD5 438 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CAPN8A6NHC0 703 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 HACD1B0YJ81 288 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CDX4O14627 284 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 SDC3O75056 442 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 PHF2O75151 1096 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 RECQL5O94762 991 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 HEXIM1O94992 359 aaKnown RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CLDN7O95471 211 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 IFNB1P01574 187 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 TRBC1P01850 177 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CELA2BP08218 269 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 SERPINF2P08697 491 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 ELFN1P0C7U0 828 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF806P0C7X5 589 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 VIPR1P32241 457 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 GRIA1P42261 906 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 PTGIRP43119 386 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 FNTAP49354 379 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 VPS41P49754 854 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 DRG2P55039 364 aaKnown RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 WNT3AP56704 352 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 XRCC4Q13426 336 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 DHX34Q14147 1143 aaKnown RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 SHBQ15464 509 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 SMAD1Q15797 465 aaKnown RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CSRP2Q16527 193 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CDKN3Q16667 212 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 WSCD2Q2TBF2 565 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 MAP9Q49MG5 647 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 TMEM52BQ4KMG9 183 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 SIRPB2Q5JXA9 342 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 WDR45BQ5MNZ6 344 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 NAPEPLDQ6IQ20 393 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 ERAP2Q6P179 960 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 EMBQ6PCB8 327 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 BRAT1Q6PJG6 821 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 LIPIQ6XZB0 460 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 TRIM74Q86UV6 250 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 IFT20Q8IY31 132 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 MREGQ8N565 214 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 NAT14Q8WUY8 206 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CAVIN3Q969G5 261 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 LOXL4Q96JB6 756 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 BMFQ96LC9 184 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 RUNDC3BQ96NL0 473 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 CAMK1GQ96NX5 476 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 MCCC1Q96RQ3 725 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 SLC17A9Q9BYT1 436 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 ABCG8Q9H221 673 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 TCEAL2Q9H3H9 227 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 VPS45Q9NRW7 570 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 KLF15Q9UIH9 416 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 OR1A2Q9Y585 309 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 PCDHGA5Q9Y5G8 931 aa7.92□□□□□ -1.14
CCDC40-215ENST00000576033 PCYT1BQ9Y5K3 369 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 ASCC3Q8N3C0 2202 aaKnown RBP7.92□□□□□ -1.14
CCDC40-215ENST00000576033 GOLGA6L10A0A0M3HER8 536 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 A0A1B0GTW7 788 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 TCRBV7S3A2A0A539 114 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 GOLGA6CA6NDK9 693 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 GOLGA6BA6NDN3 693 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 C4orf47A7E2U8 309 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 CCL22O00626 93 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 KHNYNO15037 678 aaKnown RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 TSPAN6O43657 245 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 TM7SF2O76062 418 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 SOD1P00441 154 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 GOLGA6DP0CG33 693 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 HNRNPA2B1P22626 353 aaKnown RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 CTSKP43235 329 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 EPHB1P54762 984 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 RPS21P63220 83 aaKnown RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 SLC7A5Q01650 507 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 PTSQ03393 145 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 CUL1Q13616 776 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 CASP8Q14790 479 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 ACOX1Q15067 660 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 UAP1L1Q3KQV9 507 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 SETMARQ53H47 684 aaPredicted RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF648Q5T619 568 aaPredicted RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 ALS2CLQ60I27 953 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 DUPD1Q68J44 220 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 KIAA1161Q6NSJ0 714 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms