RNA–Protein interactions for RNA: ENST00000575656.5

ARHGAP17-218, Transcript of Rho GTPase activating protein 17, human

TSL 3

Gene ARHGAP17, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP17-218	ENST00000575656	COBLL1	Q53SF7	1204 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	PRR30	Q53SZ7	412 aa	Predicted RBP	9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	WDR74	Q6RFH5	385 aa	Predicted RBP	9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	C11orf57	Q6ZUT1	292 aa	Predicted RBP	9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	TMEM135	Q86UB9	458 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	DRC7	Q8IY82	874 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	SMYD4	Q8IYR2	804 aa	Predicted RBP	9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	NRSN1	Q8IZ57	195 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	PATE1	Q8WXA2	126 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	HMCES	Q96FZ2	354 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	GDAP1L1	Q96MZ0	367 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	TRIM55	Q9BYV6	548 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	PCDH12	Q9NPG4	1184 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	PPP4R2	Q9NY27	417 aa		9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	PCDHGA9	Q9Y5G4	932 aa	Known RBP	9.47	□□□□□ -0.89
ARHGAP17-218	ENST00000575656	TNRC6A	Q8NDV7	1962 aa	Known RBP	9.46	□□□□□ -0.89
ARHGAP17-218	ENST00000575656		A0A1B0GVL5	298 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	GOLGA6L3	A6NEY3	463 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	SRGAP2	O75044	1071 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	DNAJB5	O75953	348 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	TMCC1	O94876	653 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CBX6	O95503	412 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	F9	P00740	461 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ERBB2	P04626	1255 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CEACAM5	P06731	702 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	FASLG	P48023	281 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	NRG1	Q02297	640 aa	Predicted RBP	9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	RALGDS	Q12967	914 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	RAPGEF1	Q13905	1077 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ERV3-1	Q14264	604 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	SLC25A52	Q3SY17	297 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	INO80D	Q53TQ3	878 aa	Predicted RBP	9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ANKRD40	Q6AI12	368 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ATL3	Q6DD88	541 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	KDELC2	Q7Z4H8	507 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ZSWIM9	Q86XI8	627 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PELI3	Q8N2H9	469 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	EHBP1	Q8NDI1	1231 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PRR7	Q8TB68	274 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CASKIN2	Q8WXE0	1202 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CCDC47	Q96A33	483 aa	Known RBP	9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	MOCOS	Q96EN8	888 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	TBCB	Q99426	244 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	GSDMC	Q9BYG8	508 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	MAGEH1	Q9H213	219 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CROT	Q9UKG9	612 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PCDHGC3	Q9UN70	934 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ENTPD4	Q9Y227	616 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	SLC5A6	Q9Y289	635 aa		9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	OAS3	Q9Y6K5	1087 aa	Known RBP	9.46	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	BECN2	A8MW95	431 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	INSIG1	O15503	277 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	HNRNPR	O43390	633 aa	Known RBP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	KDELR3	O43731	214 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	RECQL5	O94762	991 aa	Predicted RBP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	MYCLP1	P12525	358 aa	Predicted RBP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ZNF28	P17035	718 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	AK4	P27144	223 aa	Predicted RBP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	GNA15	P30679	374 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	DLST	P36957	453 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PRCP	P42785	496 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	MAPKAPK2	P49137	400 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	NDST2	P52849	883 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	DEUP1	Q05D60	604 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ILF3	Q12906	894 aa	Known RBP eCLIP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PTPN20	Q4JDL3	420 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	AFMID	Q63HM1	303 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PNCK	Q6P2M8	343 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	SCARF2	Q96GP6	870 aa	Predicted RBP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	TEX101	Q9BY14	249 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	FRMD8	Q9BZ67	464 aa	Predicted RBP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	TMEM248	Q9NWD8	314 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	9.45	□□□□□ -0.9	9e-6	■□□□□ 9.2
ARHGAP17-218	ENST00000575656	LHX3	Q9UBR4	397 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ATP8A1	Q9Y2Q0	1164 aa		9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	NIPBL	Q6KC79	2804 aa	eCLIP	9.45	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PDE2A	O00408	941 aa	Predicted RBP	9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	POLR1C	O15160	346 aa	Predicted RBP	9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	THAP12	O43422	761 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CREG1	O75629	220 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CEACAM4	O75871	244 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PIGN	O95427	931 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	IGSF6	O95976	241 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	NEFL	P07196	543 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	ANKRD34C	P0C6C1	535 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	KRT5	P13647	590 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	RHOQ	P17081	205 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	VARS	P26640	1264 aa	Known RBP	9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	SCNN1A	P37088	669 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	LEPR	P48357	1165 aa	Known RBP	9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	SULT1E1	P49888	294 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	PGD	P52209	483 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CTBS	Q01459	385 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	LRRC63	Q05C16	580 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	RAD51	Q06609	339 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	LAMB3	Q13751	1172 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	TRNP1	Q6NT89	227 aa		9.44	□□□□□ -0.9
ARHGAP17-218	ENST00000575656	JMJD6	Q6NYC1	403 aa	Predicted RBP	9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms