RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 BPTFQ12830 3046 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 EXOC1LA0A1B0GW35 172 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 CXorf49A8MYA2 514 aaPredicted RBP24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 SPINT1O43278 529 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 PAMP19021 973 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 VIPR1P32241 457 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 DRD3P35462 400 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 P2RY2P41231 377 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 NEK3P51956 506 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 KIAA0930Q6ICG6 404 aaPredicted RBP24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 ERAP2Q6P179 960 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 TMPRSS6Q8IU80 811 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 SYNPOQ8N3V7 929 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 HDAC10Q969S8 669 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 CYTH2Q99418 400 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 HDAC8Q9BY41 377 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 SUDS3Q9H7L9 328 aaPredicted RBP24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 NLE1Q9NVX2 485 aaPredicted RBP24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 SLC17A6Q9P2U8 582 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 GGT7Q9UJ14 662 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 SMIM23A6NLE4 172 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 STK25O00506 426 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 STX7O15400 261 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 CYP2A6P11509 494 aaPredicted RBP24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 C5AR1P21730 350 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 HMGCLP35914 325 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 MMP12P39900 470 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 ARCN1P48444 511 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 PDE1BQ01064 536 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 ACVR1Q04771 509 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 FRG1Q14331 258 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 STAT4Q14765 748 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 LRIG3Q6UXM1 1119 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 KCNMB4Q86W47 210 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 RASSF3Q86WH2 238 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 EPS8L3Q8TE67 593 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 TBATAQ96M53 351 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 MED4Q9NPJ6 270 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 IL17CQ9P0M4 197 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 RIMKLBQ9ULI2 386 aa24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 FNDC3AQ9Y2H6 1198 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-213ENST00000574428 FAM159BA6NKW6 160 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 POC1B-GALNT4F8VUJ3 575 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 RPP40O75818 363 aaKnown RBP24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 SYF2O95926 243 aaKnown RBP24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 NFKBIAP25963 317 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 MGAT5Q09328 741 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 RALGDSQ12967 914 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 CRY1Q16526 586 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 HSP90AA5PQ58FG0 334 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 PIP5KL1Q5T9C9 394 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 TRIM67Q6ZTA4 783 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 DPPA4Q7L190 304 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 CTAGE3PQ8IX95 158 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 PEX13Q92968 403 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 PBXIP1Q96AQ6 731 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 RUFY1Q96T51 708 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 NELL2Q99435 816 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 CCDC77Q9BR77 488 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 SERGEFQ9UGK8 458 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 PKP3Q9Y446 797 aa24.04■■□□□ 1.44
ATPAF1-213ENST00000574428 A0A1W2PP55 124 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 TCRBV21S2A2A0A5A6 115 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 OR51F1A6NGY5 319 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 GOLGA8CPA6NN73 597 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 SLCO1A2P46721 670 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 EIF3BP55884 814 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 PRAMEP78395 509 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 ARHGEF7Q14155 803 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 GAS6Q14393 721 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 KLHL38Q2WGJ6 581 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 HSP90B2PQ58FF3 399 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 CEP85LQ5SZL2 805 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 PDPK2PQ6A1A2 396 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 CYS1Q717R9 158 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 HDDC3Q8N4P3 179 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 OR6P1Q8NGX9 317 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 C2orf42Q9NWW7 574 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 CCDC162PA2VCL2 907 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 POLR3GO15318 223 aaPredicted RBP24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 DNTTP04053 509 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 ZXDAP98168 799 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 PTSQ03393 145 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 PPM1NQ8N819 430 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 CDKN2AIPNLQ96HQ2 116 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 AGAP2Q99490 1192 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 WRAP53Q9BUR4 548 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 IARS2Q9NSE4 1012 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 FKBPLQ9UIM3 349 aa24.03■■□□□ 1.44
ATPAF1-213ENST00000574428 CHURC1-FNTBB4DL54 471 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 AREL1O15033 823 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 UGT1A9O60656 530 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 RNASEH2AO75792 299 aaKnown RBP24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 C1SP09871 688 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 NDUFV2P19404 249 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 GCAP28676 217 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 AGBL4Q5VU57 503 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 PJA1Q8NG27 643 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 GANCQ8TET4 914 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms