RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CACNB4O00305 520 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 TPP1O14773 563 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 RRP8O43159 456 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 USP12O75317 370 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 CSO75390 466 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GCATO75600 419 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 RECQL5O94762 991 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 RASGRP1O95267 797 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 ATP1A1P05023 1023 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 CYP1A2P05177 515 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 CELA2BP08218 269 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GOLGA6DP0CG33 693 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 ACTN2P35609 894 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 HSPA9P38646 679 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 PAFAH1B1P43034 410 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 MMP13P45452 471 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 PEX5P50542 639 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 HK3P52790 923 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 SRP54P61011 504 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 MAXP61244 160 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GABREP78334 506 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 SLC25A11Q02978 314 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 ITKQ08881 620 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 NSUN2Q08J23 767 aaKnown RBP eCLIP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 MTM1Q13496 603 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 ASTE1Q2TB18 679 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 MAP9Q49MG5 647 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 MARC1Q5VT66 337 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 PAPD7Q5XG87 772 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 TXNRD3NBQ6F5E7 133 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 DPPA4Q7L190 304 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 PDZD3Q86UT5 571 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GKN2Q86XP6 184 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 SLC35F3Q8IY50 421 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 SYCE1Q8N0S2 351 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 FSTL5Q8N475 847 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 NIPA2Q8N8Q9 360 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 DCBLD1Q8N8Z6 715 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 PCDH19Q8TAB3 1148 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 CTNNBL1Q8WYA6 563 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 NAT6Q93015 286 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 NT5MQ9NPB1 228 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GOLGA6AQ9NYA3 693 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GULP1Q9UBP9 304 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 PNMA8BQ9ULN7 279 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 TTLL3Q9Y4R7 772 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 U3KQA8 63 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 UNC13CQ8NB66 2214 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 A0A0U1RQJ8 604 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 EME2A4GXA9 379 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 FANCGO15287 622 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 CACNA1GO43497 2377 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 TLX3O43711 291 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 MFSD11O43934 449 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 SOCS5O75159 536 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 TNFP01375 233 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 MPOP05164 745 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 H2AFZP0C0S5 128 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 CYP2A6P11509 494 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 TGM2P21980 687 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 KELP23276 732 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 RALGDSQ12967 914 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 MMRN1Q13201 1228 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 ARHGEF7Q14155 803 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 RTP5Q14D33 572 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 ALG11Q2TAA5 492 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 C3orf38Q5JPI3 329 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 FBXO38Q6PIJ6 1188 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 FOXR1Q6PIV2 292 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 LIPIQ6XZB0 460 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 H2AFVQ71UI9 128 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 CACTIN-AS1Q8N1I8 211 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 KCTD6Q8NC69 237 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 PLA2G15Q8NCC3 412 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 ECHDC3Q96DC8 303 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 NUS1Q96E22 293 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 PDXPQ96GD0 296 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 TBATAQ96M53 351 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 NUDCD1Q96RS6 583 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 LGMNQ99538 433 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 BOCQ9BWV1 1114 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 LACRTQ9GZZ8 138 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 CLPBQ9H078 707 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 ACBD3Q9H3P7 528 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 WDR26Q9H7D7 661 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 SUDS3Q9H7L9 328 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 RCOR3Q9P2K3 495 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 RNF14Q9UBS8 474 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 B4GALT6Q9UBX8 382 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 SNX12Q9UMY4 172 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 GPR34Q9UPC5 381 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 PCDHGC4Q9Y5F7 938 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 CAPN6Q9Y6Q1 641 aa9.69□□□□□ -0.86
NPLOC4-216ENST00000574344 A0A087WV48 116 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 A0A0A6YYK5 440 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 A0A1W2PQ67 120 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 CFAP69A5D8W1 941 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 TRAFD1O14545 582 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms