RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 VIPR1P32241 457 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 CLDN2P57739 230 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 IL9RQ01113 521 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 SNX1Q13596 522 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 SUZ12Q15022 739 aaKnown RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 PCSK7Q16549 785 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 DBX2Q6ZNG2 339 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 ABI3BPQ7Z7G0 1075 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 OXR1Q8N573 874 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 DENND6BQ8NEG7 585 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 LPCAT1Q8NF37 534 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 OR13H1Q8NG92 308 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 SPATA22Q8NHS9 363 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 FAM174AQ8TBP5 190 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 SETD7Q8WTS6 366 aaKnown RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 COG1Q8WTW3 980 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 RTP4Q96DX8 246 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 LENG8Q96PV6 779 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 MCCC1Q96RQ3 725 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 SRPK1Q96SB4 655 aaKnown RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 KLF6Q99612 283 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 WRAP53Q9BUR4 548 aaKnown RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 MLPHQ9BV36 600 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-213ENST00000573577 FSD1LQ9BXM9 530 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 KCTD5Q9NXV2 234 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 B4GALT6Q9UBX8 382 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 PCOLCE2Q9UKZ9 415 aa13.57□□□□□ -0.24
RPAIN-213ENST00000573577 ANKRD66B4E2M5 251 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 PSMD11O00231 422 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 FPGTO14772 594 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 LZTS3O60299 673 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-213ENST00000573577 CBFA2T3O75081 653 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 NDST3O95803 873 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 PRLP01236 227 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 IFNB1P01574 187 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 PRKCGP05129 697 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 C6P13671 934 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 ZNF30P17039 623 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 PSMB4P28070 264 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 CASQ1P31415 396 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 GRK6P43250 576 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 LIG3P49916 1009 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 WNT3AP56704 352 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 ETF1P62495 437 aaKnown RBP13.56□□□□□ -0.24
RPAIN-213ENST00000573577 SIM1P81133 766 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-213ENST00000573577 IHHQ14623 411 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 SHBQ15464 509 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 PARP6Q2NL67 630 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 LIPIQ6XZB0 460 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 KYAT3Q6YP21 454 aaKnown RBP13.56□□□□□ -0.24
RPAIN-213ENST00000573577 GSTA5Q7RTV2 222 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 PTAR1Q7Z6K3 402 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-213ENST00000573577 C17orf53Q8N3J3 647 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-213ENST00000573577 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
RPAIN-213ENST00000573577 MS4A14Q96JA4 679 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 BMFQ96LC9 184 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 UBP1Q9NZI7 540 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 RNF14Q9UBS8 474 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 HS3ST3A1Q9Y663 406 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 ANKRD36A6QL64 1941 aa13.56□□□□□ -0.24
RPAIN-213ENST00000573577 TMEM131Q92545 1883 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 KNL1Q8NG31 2342 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 SPAARA0A1B0GVQ0 90 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 POM121BA6NF01 834 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 CAPN8A6NHC0 703 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 F5H423 210 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-213ENST00000573577 PSMD3O43242 534 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 HEXIM1O94992 359 aaKnown RBP13.55□□□□□ -0.24
RPAIN-213ENST00000573577 CTPS1P17812 591 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 HLA-DPA1P20036 260 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 EPHA8P29322 1005 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-213ENST00000573577 HNF1BP35680 557 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 RXRGP48443 463 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 GDF10P55107 478 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 RALGDSQ12967 914 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 TRIP6Q15654 476 aaKnown RBP13.55□□□□□ -0.24
RPAIN-213ENST00000573577 INAVAQ3KP66 663 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 FAM182AQ5T1J6 154 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 KDELC1Q6UW63 502 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 Q6ZSR6 202 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 KDELC2Q7Z4H8 507 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 SLC22A18ASQ8N1D0 253 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 PRELID2Q8N945 189 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 IPMKQ8NFU5 416 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 ATL2Q8NHH9 583 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 BAHD1Q8TBE0 780 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-213ENST00000573577 RHBDD1Q8TEB9 315 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 SAP25Q8TEE9 199 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 MAGOHBQ96A72 148 aaKnown RBP13.55□□□□□ -0.24
RPAIN-213ENST00000573577 CENPTQ96BT3 561 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 OXNAD1Q96HP4 312 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-213ENST00000573577 TRIB3Q96RU7 358 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 LYSMD1Q96S90 227 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 GPR27Q9NS67 375 aa13.55□□□□□ -0.24
RPAIN-213ENST00000573577 PAK5Q9P286 719 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms