RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 FEM1CQ96JP0 617 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.02
SMG6-210ENST00000572205 PACSIN2Q9UNF0 486 aaPredicted RBP8.71□□□□□ -1.02
SMG6-210ENST00000572205 GPSM3Q9Y4H4 160 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 HEY1Q9Y5J3 304 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 RAI2Q9Y5P3 530 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 ST14Q9Y5Y6 855 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 KIF26BQ2KJY2 2108 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 TCRBV7S2A1N4TA0A589 114 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 ANKRD33BA6NCL7 494 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 APOC4-APOC2K7ER74 178 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 CASC3O15234 703 aaKnown RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 PRMT3O60678 531 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 TM7SF2O76062 418 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 RECQL5O94762 991 aaPredicted RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 APOC2P02655 101 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 FUCA1P04066 466 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 CSF2P04141 144 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 ATXN1LP0C7T5 689 aaKnown RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 PYGMP11217 842 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 SPINK2P20155 84 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 MX2P20592 715 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 TGM2P21980 687 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 DGKAP23743 735 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 VIPR1P32241 457 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 TRIM23P36406 574 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 RABIFP47224 123 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 ATXN3P54252 364 aaPredicted RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 C21orf59P57076 290 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 CCDC15Q0P6D6 951 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 ZNF211Q13398 564 aaPredicted RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 ZNF662Q6ZS27 426 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 PTAR1Q7Z6K3 402 aaPredicted RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 PARGQ86W56 976 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 RFX6Q8HWS3 928 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 ZNF548Q8NEK5 533 aaPredicted RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 CXorf40AQ8TE69 158 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 GATA6Q92908 595 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 HAUS1Q96CS2 278 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 DTD2Q96FN9 168 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 KLHDC7BQ96G42 594 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 PDXPQ96GD0 296 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 OXNAD1Q96HP4 312 aaPredicted RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 TEKT5Q96M29 485 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 LRRC61Q9BV99 259 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 CLPBQ9H078 707 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 KCNF1Q9H3M0 494 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 C10orf88Q9H8K7 445 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 FGF22Q9HCT0 170 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 RBM22Q9NW64 420 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMG6-210ENST00000572205 EFR3BQ9Y2G0 817 aa8.7□□□□□ -1.02
SMG6-210ENST00000572205 R3HDM2Q9Y2K5 976 aaKnown RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 PCYT1BQ9Y5K3 369 aaPredicted RBP8.7□□□□□ -1.02
SMG6-210ENST00000572205 MACROD2A1Z1Q3 448 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 TMEM202A6NGA9 273 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 PSMD11O00231 422 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 YKT6O15498 198 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 LZTS3O60299 673 aaPredicted RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 DFNA5O60443 496 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 GCATO75600 419 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 FTCDO95954 541 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 MT-CYBP00156 380 aaPredicted RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 JCHAINP01591 159 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ELFN1P0C7U0 828 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 TNNT1P13805 278 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 CTPS1P17812 591 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 HNF1BP35680 557 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ETV3P41162 512 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 CD86P42081 329 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 GRK6P43250 576 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 STC1P52823 247 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 KIAA1024LP59773 190 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 SIM1P81133 766 aaPredicted RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 PTSQ03393 145 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 DNAJC3Q13217 504 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 MSLNQ13421 630 aaPredicted RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 MTM1Q13496 603 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 PDE1CQ14123 709 aaPredicted RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 STAT4Q14765 748 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 NFATC4Q14934 902 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 PDK1Q15118 436 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 SIX1Q15475 284 aaPredicted RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 TRIP6Q15654 476 aaKnown RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 OCLNQ16625 522 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ALG11Q2TAA5 492 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ZNF542PQ5EBM4 170 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 LRRC66Q68CR7 880 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 CRTC1Q6UUV9 634 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ADAT2Q7Z6V5 191 aaKnown RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 LRRC8AQ8IWT6 810 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ZNF567Q8N184 647 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 OXR1Q8N573 874 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 OR4C6Q8NH72 309 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 SPATA22Q8NHS9 363 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ACTL9Q8TC94 416 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ADAMTS14Q8WXS8 1223 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 RBM41Q96IZ5 413 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms