RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 FASLGP48023 281 aa18.06■□□□□ 0.48
CLK3-227ENST00000570296 PPM1FP49593 454 aaPredicted RBP18.06■□□□□ 0.48
CLK3-227ENST00000570296 CHRNA6Q15825 494 aa18.06■□□□□ 0.48
CLK3-227ENST00000570296 FAM183BPQ6ZVS7 135 aa18.06■□□□□ 0.48
CLK3-227ENST00000570296 RRAGAQ7L523 313 aa18.06■□□□□ 0.48
CLK3-227ENST00000570296 ZNF397Q8NF99 534 aaPredicted RBP18.06■□□□□ 0.48
CLK3-227ENST00000570296 STAMBPL1Q96FJ0 436 aa18.06■□□□□ 0.48
CLK3-227ENST00000570296 SIDT1Q9NXL6 827 aaKnown RBP18.06■□□□□ 0.48
CLK3-227ENST00000570296 LUZP4Q9P127 313 aa18.06■□□□□ 0.48
CLK3-227ENST00000570296 ARMCX3Q9UH62 379 aaPredicted RBP18.06■□□□□ 0.48
CLK3-227ENST00000570296 STAP1Q9ULZ2 295 aa18.06■□□□□ 0.48
CLK3-227ENST00000570296 DCHS2Q6V1P9 2916 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 ANKUB1A6NFN9 424 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 ZSCAN5CA6NGD5 496 aaPredicted RBP18.05■□□□□ 0.48
CLK3-227ENST00000570296 RECQL5O94762 991 aaPredicted RBP18.05■□□□□ 0.48
CLK3-227ENST00000570296 TMCC1O94876 653 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 MYCLP1P12525 358 aaPredicted RBP18.05■□□□□ 0.48
CLK3-227ENST00000570296 KRT5P13647 590 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 CASP14P31944 242 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 DEUP1Q05D60 604 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 DNASE1L3Q13609 305 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 SLC6A19Q695T7 634 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 SP5Q6BEB4 398 aaPredicted RBP18.05■□□□□ 0.48
CLK3-227ENST00000570296 GALNT6Q8NCL4 622 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 LMO3Q8TAP4 145 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 CASKIN2Q8WXE0 1202 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 NT5C3BQ969T7 300 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 SLC38A3Q99624 504 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 MFRPQ9BY79 579 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 MAGEH1Q9H213 219 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 RETREG1Q9H6L5 497 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 ATP8A1Q9Y2Q0 1164 aa18.05■□□□□ 0.48
CLK3-227ENST00000570296 PKDREJQ9NTG1 2253 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 THAP12O43422 761 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 CEACAM5P06731 702 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 ZNF28P17035 718 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 TFE3P19532 575 aaPredicted RBP18.04■□□□□ 0.48
CLK3-227ENST00000570296 MAPKAPK2P49137 400 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 SULT1E1P49888 294 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 RHOAP61586 193 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 CTBSQ01459 385 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 SLC6A3Q01959 620 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 DNM1Q05193 864 aaKnown RBP18.04■□□□□ 0.48
CLK3-227ENST00000570296 CETN1Q12798 172 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 ELOAQ14241 798 aaKnown RBP18.04■□□□□ 0.48
CLK3-227ENST00000570296 CPZQ66K79 652 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 PNCKQ6P2M8 343 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 BRAT1Q6PJG6 821 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 LEKR1Q6ZMV7 388 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 ARHGEF19Q8IW93 802 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 C19orf60Q96EN9 201 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 NCAPGQ9BPX3 1015 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 SUDS3Q9H7L9 328 aaPredicted RBP18.04■□□□□ 0.48
CLK3-227ENST00000570296 ACSS2Q9NR19 701 aa18.04■□□□□ 0.48
CLK3-227ENST00000570296 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLK3-227ENST00000570296 C21orf140B9A014 251 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 KRT86O43790 486 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 PIGNO95427 931 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 CCNYL3P0C7X3 344 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 ERCC5P28715 1186 aaPredicted RBP18.03■□□□□ 0.48
CLK3-227ENST00000570296 GNA15P30679 374 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 GARSP41250 739 aaKnown RBP18.03■□□□□ 0.48
CLK3-227ENST00000570296 GNPDA1P46926 289 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 PER3P56645 1201 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 SNX16P57768 344 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 FKBP3Q00688 224 aaKnown RBP18.03■□□□□ 0.48
CLK3-227ENST00000570296 GRM3Q14832 879 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 UGT8Q16880 541 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 INO80DQ53TQ3 878 aaPredicted RBP18.03■□□□□ 0.48
CLK3-227ENST00000570296 WDTC1Q8N5D0 677 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 SNRNP40Q96DI7 357 aaKnown RBP18.03■□□□□ 0.48
CLK3-227ENST00000570296 KREMEN1Q96MU8 473 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 SUV39H2Q9H5I1 410 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 PHPT1Q9NRX4 125 aaPredicted RBP18.03■□□□□ 0.48
CLK3-227ENST00000570296 ST14Q9Y5Y6 855 aa18.03■□□□□ 0.48
CLK3-227ENST00000570296 P4HA2O15460 535 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 TEX33O43247 280 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 KDELR3O43731 214 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 CEACAM4O75871 244 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 MAP3K6O95382 1288 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 FUCA1P04066 466 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 ANKRD34CP0C6C1 535 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 CCL11P51671 97 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 NDST2P52849 883 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 CFAP58Q5T655 872 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 ZNF761Q86XN6 746 aaPredicted RBP18.02■□□□□ 0.48
CLK3-227ENST00000570296 RHOT1Q8IXI2 618 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 NCSTNQ92542 709 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 INTS4Q96HW7 963 aaKnown RBP18.02■□□□□ 0.48
CLK3-227ENST00000570296 LURAP1Q96LR2 239 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 ZNF641Q96N77 438 aaPredicted RBP18.02■□□□□ 0.48
CLK3-227ENST00000570296 FRMD8Q9BZ67 464 aaPredicted RBP18.02■□□□□ 0.48
CLK3-227ENST00000570296 ING2Q9H160 280 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 ACTL8Q9H568 366 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 NDFIP2Q9NV92 336 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 PADI1Q9ULC6 663 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 SUFUQ9UMX1 484 aa18.02■□□□□ 0.48
CLK3-227ENST00000570296 GOLGA6L3A6NEY3 463 aa18.01■□□□□ 0.47
CLK3-227ENST00000570296 INSIG1O15503 277 aa18.01■□□□□ 0.47
CLK3-227ENST00000570296 BUB1O43683 1085 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms