RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 FAM169AQ9Y6X4 670 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 A0A1W2PP55 124 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 CCL22O00626 93 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 NEMP1O14524 444 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 RNASEH2AO75792 299 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 RPP40O75818 363 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 NUDT17P0C025 328 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 ZNF30P17039 623 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 NDUFV2P19404 249 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 DRD3P35462 400 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 DGKEP52429 567 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 ZBTB16Q05516 673 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 CCDC15Q0P6D6 951 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 FRG1Q14331 258 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 GAS6Q14393 721 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 PTPRCAPQ14761 206 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 EFTUD2Q15029 972 aaKnown RBP eCLIP15.43■□□□□ 0.068e-9■■■■□ 19.7
HERPUD1-219ENST00000570273 CDKN3Q16667 212 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 LONRF1Q17RB8 773 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 PIP5KL1Q5T9C9 394 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 SYT13Q7L8C5 426 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 KCNMB4Q86W47 210 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 UNC5BQ8IZJ1 945 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 OR13J1Q8NGT2 312 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 OR2W6PQ8NHA6 318 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 HMGB4Q8WW32 186 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 RAB7BQ96AH8 199 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 CERS2Q96G23 380 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 OMDQ99983 421 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 CHRDQ9H2X0 955 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 BPIFA1Q9NP55 256 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 PPANQ9NQ55 473 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 NLE1Q9NVX2 485 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 IL1RAPL1Q9NZN1 696 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 SERGEFQ9UGK8 458 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 GGT7Q9UJ14 662 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 EXOC1LA0A1B0GW35 172 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 TNFRSF10AO00220 468 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 AREL1O15033 823 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 SPINT1O43278 529 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 VAPBO95292 243 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 SHBGP04278 402 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 C1SP09871 688 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 ELFN1P0C7U0 828 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 ACADMP11310 421 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 HMGCLP35914 325 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 ARSDP51689 593 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 STC1P52823 247 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 PRAMEP78395 509 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 ACVR1Q04771 509 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 MGAT5Q09328 741 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 RALGDSQ12967 914 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 KLHL38Q2WGJ6 581 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 AGBL4Q5VU57 503 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 PDPK2PQ6A1A2 396 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 TSTD1Q8NFU3 115 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 CLDN23Q96B33 292 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 MRGPRX1Q96LB2 322 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 RUFY1Q96T51 708 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 CYTH2Q99418 400 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 CCDC77Q9BR77 488 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 WRAP53Q9BUR4 548 aaKnown RBP15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 FUT8Q9BYC5 575 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 ACSS3Q9H6R3 686 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 ZNF446Q9NWS9 450 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 FBXL12Q9NXK8 326 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 IL17CQ9P0M4 197 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 BCCIPQ9P287 314 aaKnown RBP eCLIP15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 FKBPLQ9UIM3 349 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 SCML1Q9UN30 329 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 FNDC3AQ9Y2H6 1198 aaKnown RBP15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 ATG2BQ96BY7 2078 aa15.42■□□□□ 0.06
HERPUD1-219ENST00000570273 DCXO43602 365 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 ALDH1A2O94788 518 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 IVLP07476 585 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 ERVK-10P10266 1014 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 GABRG2P18507 467 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 ARNTP27540 789 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 HADHAP40939 763 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 SFSWAPQ12872 951 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 THOC5Q13769 683 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 STAT4Q14765 748 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 ALS2CLQ60I27 953 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 AFTPHQ6ULP2 937 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 LRIG3Q6UXM1 1119 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 PGBD3Q8N328 593 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 OTUD6BQ8N6M0 293 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 OR6P1Q8NGX9 317 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 CXorf40AQ8TE69 158 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 CDKL2Q92772 493 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 EDAQ92838 391 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 HDAC10Q969S8 669 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 EID2BQ96D98 161 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 TBATAQ96M53 351 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 ZIM3Q96PE6 472 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 HHIPQ96QV1 700 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 VIPAS39Q9H9C1 493 aa15.41■□□□□ 0.06
HERPUD1-219ENST00000570273 C2orf42Q9NWW7 574 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms