RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 EPHX4Q8IUS5 362 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 ZNF485Q8NCK3 441 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 LSM14AQ8ND56 463 aaKnown RBP3.29□□□□□ -1.88
UBR1-209ENST00000569243 RILPL2Q969X0 211 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 TBC1D20Q96BZ9 403 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 FBXL8Q96CD0 374 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 ZNF501Q96CX3 271 aaPredicted RBP3.29□□□□□ -1.88
UBR1-209ENST00000569243 LGALS12Q96DT0 336 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 ZC3HAV1LQ96H79 300 aaKnown RBP3.29□□□□□ -1.88
UBR1-209ENST00000569243 F2RL3Q96RI0 385 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 PYM1Q9BRP8 204 aaKnown RBP3.29□□□□□ -1.88
UBR1-209ENST00000569243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.29□□□□□ -1.88
UBR1-209ENST00000569243 TAOK3Q9H2K8 898 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 SCRT2Q9NQ03 307 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 SMCHD1A6NHR9 2005 aa3.29□□□□□ -1.88
UBR1-209ENST00000569243 PDS5AQ29RF7 1337 aaKnown RBP3.28□□□□□ -1.88
UBR1-209ENST00000569243 PEX12O00623 359 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 PER2O15055 1255 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 MMP2P08253 660 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 FGF5P12034 268 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 RXRAP19793 462 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 AGAP20933 346 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 S1PR1P21453 382 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 TMPOP42166 694 aaKnown RBP3.28□□□□□ -1.88
UBR1-209ENST00000569243 HOXA1P49639 335 aaPredicted RBP3.28□□□□□ -1.88
UBR1-209ENST00000569243 MMP14P50281 582 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 CTF1Q16619 201 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 GRAMD1BQ3KR37 738 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 MTSS1LQ765P7 747 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 LINGO2Q7L985 606 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 SH2D6Q7Z4S9 175 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 TMEM219Q86XT9 240 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 RNF113BQ8IZP6 322 aaKnown RBP3.28□□□□□ -1.88
UBR1-209ENST00000569243 CNBD1Q8NA66 436 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 BEST2Q8NFU1 509 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 ABTB1Q969K4 478 aaPredicted RBP3.28□□□□□ -1.88
UBR1-209ENST00000569243 REEP2Q9BRK0 252 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 MXRA8Q9BRK3 442 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 HAUS8Q9BT25 410 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 LRRC4Q9HBW1 653 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 MKKSQ9NPJ1 570 aaPredicted RBP3.28□□□□□ -1.88
UBR1-209ENST00000569243 CNGB3Q9NQW8 809 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 BEX4Q9NWD9 120 aaPredicted RBP3.28□□□□□ -1.88
UBR1-209ENST00000569243 AMDHD2Q9Y303 409 aa3.28□□□□□ -1.88
UBR1-209ENST00000569243 A0A1B0GU03 582 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 A0A1W2PNU3 283 aaPredicted RBP3.27□□□□□ -1.89
UBR1-209ENST00000569243 TAF4O00268 1085 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 KLK10O43240 276 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 ZNF883P0CG24 379 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 ETFAP13804 333 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 CLDN2P57739 230 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
UBR1-209ENST00000569243 TAF5Q15542 800 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 C14orf177Q52M58 125 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 WDR45BQ5MNZ6 344 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 PAPPA-AS1Q5QFB9 102 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 SERTAD4-AS1Q5TG53 156 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 NAA35Q5VZE5 725 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 MOB3CQ70IA8 216 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 TAOK1Q7L7X3 1001 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 SLC9B2Q86UD5 537 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 FAM160B2Q86V87 743 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 SUGP1Q8IWZ8 645 aaKnown RBP3.27□□□□□ -1.89
UBR1-209ENST00000569243 C1orf87Q8N0U7 546 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 TAS1R2Q8TE23 839 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 NOC3LQ8WTT2 800 aaKnown RBP3.27□□□□□ -1.89
UBR1-209ENST00000569243 COG8Q96MW5 612 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 ZNF570Q96NI8 536 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 LITAFQ99732 161 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 HERPUD2Q9BSE4 406 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 ESRP2Q9H6T0 727 aaKnown RBP3.27□□□□□ -1.89
UBR1-209ENST00000569243 HCFC1R1Q9NWW0 138 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 ALKBH4Q9NXW9 302 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 DDX43Q9NXZ2 648 aaKnown RBP3.27□□□□□ -1.89
UBR1-209ENST00000569243 TAAR2Q9P1P5 351 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 KCNS2Q9ULS6 477 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 PCDHGB3Q9Y5G1 929 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 STON1Q9Y6Q2 735 aa3.27□□□□□ -1.89
UBR1-209ENST00000569243 IGKV3D-15A0A087WSY6 115 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 PABPN1LA6NDY0 278 aaKnown RBP3.26□□□□□ -1.89
UBR1-209ENST00000569243 PCDH7O60245 1069 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 GUCY1B2O75343 617 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 MAOAP21397 527 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 HNRNPH2P55795 449 aaKnown RBP3.26□□□□□ -1.89
UBR1-209ENST00000569243 SREBF2Q12772 1141 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 PPFIA1Q13136 1202 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 PDSS1Q5T2R2 415 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 SLC35E4Q6ICL7 350 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 METTL2BQ6P1Q9 378 aaKnown RBP3.26□□□□□ -1.89
UBR1-209ENST00000569243 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 FOXRED2Q8IWF2 684 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 KIAA2013Q8IYS2 634 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 DSELQ8IZU8 1212 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 C11orf65Q8NCR3 313 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 TNIP2Q8NFZ5 429 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 CADM4Q8NFZ8 388 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 HERVK_113Q902F9 699 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 METTL2AQ96IZ6 378 aaKnown RBP3.26□□□□□ -1.89
UBR1-209ENST00000569243 MROH8Q9H579 483 aa3.26□□□□□ -1.89
UBR1-209ENST00000569243 ITM2CQ9NQX7 267 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms