RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PCDHGA7Q9Y5G6 932 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SLC30A1Q9Y6M5 507 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 GOLGB1Q14789 3259 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 CENPXA8MT69 81 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CCRL2O00421 344 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PIP5K1BO14986 540 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ADAM23O75077 832 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ANXA9O76027 345 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ENO2P09104 434 aaPredicted RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 USP17L7P0C7H9 530 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 HOXA10P31260 410 aaPredicted RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 KCNJ8Q15842 424 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CRY2Q49AN0 593 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ABI1Q8IZP0 508 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CLYBLQ8N0X4 340 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 TXNDC5Q8NBS9 432 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 PRRG3Q9BZD7 231 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 AKTIPQ9H8T0 292 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SIAEQ9HAT2 523 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SP110Q9HB58 689 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 TRPV5Q9NQA5 729 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 FAM8A1Q9UBU6 413 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PADI4Q9UM07 663 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CORINQ9Y5Q5 1042 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 MTSS1O43312 755 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 AP1G1O43747 822 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 NDUFS2O75306 463 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 NDUFS3O75489 264 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PABPC1P11940 636 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 IL4RP24394 825 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 FMO3P31513 532 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ACADSBP45954 432 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PITX1P78337 314 aaPredicted RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 GSTM4Q03013 218 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SPANXN2Q5MJ10 180 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 GJC2Q5T442 439 aaPredicted RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 TWF2Q6IBS0 349 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 ANKRD26P1Q6NSI1 321 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 XRRA1Q6P2D8 792 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PRMT9Q6P2P2 845 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 BORAQ6PGQ7 559 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SLC22A9Q8IVM8 553 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 TRPV3Q8NET8 790 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ABHD11Q8NFV4 315 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 RDH11Q8TC12 318 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 HNRNPABQ99729 332 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 TKTL2Q9H0I9 626 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 INIPQ9NRY2 104 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SLC2A6Q9UGQ3 507 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PIN4Q9Y237 131 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 BTBD3Q9Y2F9 522 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 AZIN1O14977 448 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 LRIG2O94898 1065 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 AP2A1O95782 977 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 UGT2B4P06133 528 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 CYP2C8P10632 490 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 SLC2A4P14672 509 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 MATN1P21941 496 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 AZGP1P25311 298 aaKnown RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 PTPN3P26045 913 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ZNF132P52740 706 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 TXNL4AP83876 142 aaKnown RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 PCID2Q5JVF3 399 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 HORMAD1Q86X24 394 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 EID3Q8N140 333 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 EFHBQ8N7U6 833 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 TFAP2CQ92754 450 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 LRCH3Q96II8 777 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 KCNA7Q96RP8 456 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 TBL1YQ9BQ87 522 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ERGIC3Q9Y282 383 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ROBO1Q9Y6N7 1651 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 MDM4O15151 490 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 MED26O95402 600 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 BDNFP23560 247 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ARL2P36404 184 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 NOMO2Q5JPE7 1267 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 RBM20Q5T481 1227 aaKnown RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 SLC26A9Q7LBE3 791 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 LYSMD3Q7Z3D4 306 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ZC3HC1Q86WB0 502 aaKnown RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 FBXO16Q8IX29 292 aaPredicted RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 FBXO39Q8N4B4 442 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 UTP15Q8TED0 518 aaKnown RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 ACOX2Q99424 681 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 HOPXQ9BPY8 73 aaPredicted RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 APOL5Q9BWW9 433 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ANKRD60Q9BZ19 345 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ULBP1Q9BZM6 244 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 LHPPQ9H008 270 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 TPK1Q9H3S4 243 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 CITO14578 2027 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 MYH9P35579 1960 aaKnown RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 ATG7O95352 703 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 EDN1P05305 212 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 ALOX5P09917 674 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 POU1F1P28069 291 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 OXTRP30559 389 aa10.91□□□□□ -0.66
PALB2-206ENST00000568219 IDH2P48735 452 aaKnown RBP10.91□□□□□ -0.66
PALB2-206ENST00000568219 GSK3BP49841 420 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms