RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 C17orf82Q86X59 251 aaPredicted RBP15.01□□□□□ -0.01
RNF40-209ENST00000566703 GPBAR1Q8TDU6 330 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 NSMCE1Q8WV22 266 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 TEKT4Q8WW24 435 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 SCRN2Q96FV2 425 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 MGME1Q9BQP7 344 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 LGR4Q9BXB1 951 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 TRNAU1APQ9NX07 287 aaKnown RBP15.01□□□□□ -0.01
RNF40-209ENST00000566703 MYO1AQ9UBC5 1043 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 PPIL1Q9Y3C6 166 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 PCDHGC4Q9Y5F7 938 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 BZW2Q9Y6E2 419 aaKnown RBP15.01□□□□□ -0.01
RNF40-209ENST00000566703 A0A1B0GTH6 734 aa15□□□□□ -0.01
RNF40-209ENST00000566703 PRSS38A1L453 326 aa15□□□□□ -0.01
RNF40-209ENST00000566703 A8MX80 341 aa15□□□□□ -0.01
RNF40-209ENST00000566703 MAFKO60675 156 aa15□□□□□ -0.01
RNF40-209ENST00000566703 AMPD1P23109 780 aa15□□□□□ -0.01
RNF40-209ENST00000566703 SERPINB6P35237 376 aa15□□□□□ -0.01
RNF40-209ENST00000566703 B4GALNT1Q00973 533 aa15□□□□□ -0.01
RNF40-209ENST00000566703 NR1I3Q14994 352 aa15□□□□□ -0.01
RNF40-209ENST00000566703 TCEA2Q15560 299 aa15□□□□□ -0.01
RNF40-209ENST00000566703 CNGA3Q16281 694 aa15□□□□□ -0.01
RNF40-209ENST00000566703 MARC1Q5VT66 337 aa15□□□□□ -0.01
RNF40-209ENST00000566703 E4F1Q66K89 784 aaPredicted RBP15□□□□□ -0.01
RNF40-209ENST00000566703 SPECC1LQ69YQ0 1117 aa15□□□□□ -0.01
RNF40-209ENST00000566703 SPRED1Q7Z699 444 aa15□□□□□ -0.01
RNF40-209ENST00000566703 NLRP8Q86W28 1048 aa15□□□□□ -0.01
RNF40-209ENST00000566703 TP53INP2Q8IXH6 220 aa15□□□□□ -0.01
RNF40-209ENST00000566703 PGBD5Q8N414 524 aa15□□□□□ -0.01
RNF40-209ENST00000566703 Q8N9G6 341 aaPredicted RBP15□□□□□ -0.01
RNF40-209ENST00000566703 NUS1Q96E22 293 aa15□□□□□ -0.01
RNF40-209ENST00000566703 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
RNF40-209ENST00000566703 CSPG4P5Q96PW8 444 aa15□□□□□ -0.01
RNF40-209ENST00000566703 CMKLR1Q99788 373 aa15□□□□□ -0.01
RNF40-209ENST00000566703 GSDMCQ9BYG8 508 aa15□□□□□ -0.01
RNF40-209ENST00000566703 FOXP3Q9BZS1 431 aa15□□□□□ -0.01
RNF40-209ENST00000566703 NOD2Q9HC29 1040 aa15□□□□□ -0.01
RNF40-209ENST00000566703 MOSPD1Q9UJG1 213 aa15□□□□□ -0.01
RNF40-209ENST00000566703 RNF215Q9Y6U7 377 aa15□□□□□ -0.01
RNF40-209ENST00000566703 EFSO43281 561 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 CPP00450 1065 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 CEACAM5P06731 702 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 RARAP10276 462 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 SKILP12757 684 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 KRT10P13645 584 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 CDH6P55285 790 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 DPTQ07507 201 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 ILF3Q12906 894 aaKnown RBP eCLIP14.99□□□□□ -0.01
RNF40-209ENST00000566703 ZSCAN23Q3MJ62 389 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 ZNF438Q7Z4V0 828 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 JAMLQ86YT9 394 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 NDUFAF2Q8N183 169 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 PELI3Q8N2H9 469 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 NIPA2Q8N8Q9 360 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 CCL4L1Q8NHW4 92 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 SYN2Q92777 582 aaPredicted RBP14.99□□□□□ -0.01
RNF40-209ENST00000566703 DTD2Q96FN9 168 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 MED8Q96G25 268 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 MCCC1Q96RQ3 725 aaPredicted RBP14.99□□□□□ -0.01
RNF40-209ENST00000566703 FRMD8Q9BZ67 464 aaPredicted RBP14.99□□□□□ -0.01
RNF40-209ENST00000566703 ETNK2Q9NVF9 386 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 RCOR3Q9P2K3 495 aaPredicted RBP14.99□□□□□ -0.01
RNF40-209ENST00000566703 IP6K2Q9UHH9 426 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 LOXL2Q9Y4K0 774 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 LRRK1Q38SD2 2015 aa14.99□□□□□ -0.01
RNF40-209ENST00000566703 B8ZZF3 427 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 B4GAT1O43505 415 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 PGLSO95336 258 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 CPNE6O95741 557 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 FGF1P05230 155 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 IVLP07476 585 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 LIPCP11150 499 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 CES1P23141 567 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 CD82P27701 267 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 MMP13P45452 471 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 GPR3P46089 330 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 ZNF165P49910 485 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 SQSTM1Q13501 440 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 NR1D2Q14995 579 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 SMTNL2Q2TAL5 461 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 ARMC12Q5T9G4 340 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 USP45Q70EL2 814 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 PIM3Q86V86 326 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 HEATR4Q86WZ0 1026 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 NRROSQ86YC3 692 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 SLITRK4Q8IW52 837 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 RAVER1Q8IY67 606 aaKnown RBP14.98□□□□□ -0.01
RNF40-209ENST00000566703 ATPAF2Q8N5M1 289 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 TEX26Q8N6G2 289 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 PDCD6IPQ8WUM4 868 aaKnown RBP14.98□□□□□ -0.01
RNF40-209ENST00000566703 HSPH1Q92598 858 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 SCARF2Q96GP6 870 aaPredicted RBP14.98□□□□□ -0.01
RNF40-209ENST00000566703 CARS2Q9HA77 564 aaKnown RBP14.98□□□□□ -0.01
RNF40-209ENST00000566703 PCDH18Q9HCL0 1135 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.98□□□□□ -0.01
RNF40-209ENST00000566703 SPATS2LQ9NUQ6 558 aaKnown RBP14.98□□□□□ -0.01
RNF40-209ENST00000566703 AKAP7Q9P0M2 348 aaPredicted RBP14.98□□□□□ -0.01
RNF40-209ENST00000566703 SEPT10Q9P0V9 454 aa14.98□□□□□ -0.01
RNF40-209ENST00000566703 PISDQ9UG56 409 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms