RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 RECQLP46063 649 aaPredicted RBP19.57■□□□□ 0.72
CLN6-205ENST00000564846 STC1P52823 247 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 TAS2R39P59534 338 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 IRF9Q00978 393 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 ATAT1Q5SQI0 421 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 ATG16L1Q676U5 607 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 DPY19L3Q6ZPD9 716 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 SPATA21Q7Z572 469 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 LDB1Q86U70 411 aaPredicted RBP19.57■□□□□ 0.72
CLN6-205ENST00000564846 ETFBKMTQ8IXQ9 262 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 PLD6Q8N2A8 252 aaKnown RBP19.57■□□□□ 0.72
CLN6-205ENST00000564846 ECHDC3Q96DC8 303 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 TCF12Q99081 682 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 FAM83CQ9BQN1 747 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 EBF3Q9H4W6 596 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 SUV39H2Q9H5I1 410 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 ZFP14Q9HCL3 533 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 INTS10Q9NVR2 710 aaKnown RBP19.57■□□□□ 0.72
CLN6-205ENST00000564846 ANKRD36A6QL64 1941 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 A0A087X1B8 175 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 WASH3PC4AMC7 463 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 PHGDHO43175 533 aaKnown RBP19.57■□□□□ 0.72
CLN6-205ENST00000564846 APOA4P06727 396 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 SRPRAP08240 638 aaKnown RBP19.57■□□□□ 0.72
CLN6-205ENST00000564846 ALPIP09923 528 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 BGNP21810 368 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 FCARP24071 287 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 PMLP29590 882 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 CCDC91Q7Z6B0 441 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 CEP97Q8IW35 865 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 VOPP1Q96AW1 172 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 MRGPRX3Q96LB0 322 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 MECRQ9BV79 373 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 IL17CQ9P0M4 197 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 CDH22Q9UJ99 828 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 USP15Q9Y4E8 981 aaPredicted RBP19.57■□□□□ 0.72
CLN6-205ENST00000564846 CAPN8A6NHC0 703 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 BNIP3LO60238 219 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 TULP3O75386 442 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 IL1BP01584 269 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 DLDP09622 509 aaKnown RBP19.56■□□□□ 0.72
CLN6-205ENST00000564846 ARSAP15289 507 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 HNRNPH2P55795 449 aaKnown RBP19.56■□□□□ 0.72
CLN6-205ENST00000564846 ADAM15Q13444 863 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 SEMA3AQ14563 771 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 PTPRRQ15256 657 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 HECTD2Q5U5R9 776 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 FAM45BPQ6NSW5 357 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 CES5AQ6NT32 575 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 CGB2Q6NT52 195 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 Q6ZVU0 165 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 LYSMD3Q7Z3D4 306 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 FAM45AQ8TCE6 357 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 ZFYVE19Q96K21 471 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 LYSMD1Q96S90 227 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 NDNQ99608 321 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 C1QTNF1Q9BXJ1 281 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 CIPCQ9C0C6 399 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 ZFYVE1Q9HBF4 777 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 NMRAL1Q9HBL8 299 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 COPG2Q9UBF2 871 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 MID2Q9UJV3 735 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 VPS9D1Q9Y2B5 631 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 VWA7Q9Y334 891 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 PPIL1Q9Y3C6 166 aa19.56■□□□□ 0.72
CLN6-205ENST00000564846 PFDN6O15212 129 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 MC4RP32245 332 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 HNF1BP35680 557 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 IRX4P78413 519 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 CHI3L2Q15782 390 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 RBM20Q5T481 1227 aaKnown RBP19.55■□□□□ 0.72
CLN6-205ENST00000564846 TANGO2Q6ICL3 276 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 OTOAQ7RTW8 1153 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 C12orf40Q86WS4 652 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 OR2A12Q8NGT7 310 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 TTC8Q8TAM2 541 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 FRS2Q8WU20 508 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 CYB5D2Q8WUJ1 264 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 TSSK1BQ9BXA7 367 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 ZDHHC6Q9H6R6 413 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 ECT2Q9H8V3 914 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 ZNF358Q9NW07 568 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 FKBPLQ9UIM3 349 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 GMPRP36959 345 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 FCHO2Q0JRZ9 810 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 TSNAXIP1Q2TAA8 658 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 AARS2Q5JTZ9 985 aaKnown RBP19.55■□□□□ 0.72
CLN6-205ENST00000564846 RNF187Q5TA31 235 aaPredicted RBP19.55■□□□□ 0.72
CLN6-205ENST00000564846 SCRN2Q96FV2 425 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 PLCD4Q9BRC7 762 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 DEC1Q9P2X7 70 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 CRYL1Q9Y2S2 319 aa19.55■□□□□ 0.72
CLN6-205ENST00000564846 LAMA3Q16787 3333 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 C1orf232A0A0U1RR37 186 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 KLHL2O95198 593 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 CPA3P15088 417 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 ALDH3A1P30838 453 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 KPNA2P52292 529 aaKnown RBP19.54■□□□□ 0.72
CLN6-205ENST00000564846 PEX6Q13608 980 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 PCLAFQ15004 111 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms