RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SLC9C2Q5TAH2 1124 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 CCNI2Q6ZMN8 369 aaPredicted RBP4.79□□□□□ -1.64
UBR1-205ENST00000564540 QSOX2Q6ZRP7 698 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 SFR1Q86XK3 245 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 ODF3L1Q8IXM7 274 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 GPR108Q9NPR9 543 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 A4GNTQ9UNA3 340 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 LMX1BO60663 402 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 TIPRLO75663 272 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 FUT6P51993 359 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 SORDQ00796 357 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 PRICKLE4Q2TBC4 344 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 NAA35Q5VZE5 725 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 TAOK1Q7L7X3 1001 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 CHERPQ8IWX8 916 aaKnown RBP4.78□□□□□ -1.64
UBR1-205ENST00000564540 OR2AK2Q8NG84 335 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 KLHL29Q96CT2 875 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 RNF125Q96EQ8 232 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 H2AFJQ9BTM1 129 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 CSTL1Q9H114 145 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 ZNF711Q9Y462 761 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 SCINQ9Y6U3 715 aa4.78□□□□□ -1.64
UBR1-205ENST00000564540 CGNL1Q0VF96 1302 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 PDS5AQ29RF7 1337 aaKnown RBP4.77□□□□□ -1.65
UBR1-205ENST00000564540 TAF4O00268 1085 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 TSPAN4O14817 238 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 SEC14L5O43304 696 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 SEC31AO94979 1220 aaKnown RBP4.77□□□□□ -1.65
UBR1-205ENST00000564540 IRF1P10914 325 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 GNAQP50148 359 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 TUBP50607 506 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
UBR1-205ENST00000564540 RELQ04864 619 aaPredicted RBP4.77□□□□□ -1.65
UBR1-205ENST00000564540 BAK1Q16611 211 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 FAM69AQ5T7M9 428 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 STPG1Q5TH74 334 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 FAM122CQ6P4D5 195 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 DSTYKQ6XUX3 929 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 FOXL2NBQ6ZUU3 175 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 HAPLN4Q86UW8 402 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 SPATA6LQ8N4H0 392 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 MAB21L3Q8N8X9 362 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 DUSP19Q8WTR2 217 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 TTC14Q96N46 770 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 SLC25A18Q9H1K4 315 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 NDST4Q9H3R1 872 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 PPP1R3EQ9H7J1 279 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 VEZTQ9HBM0 779 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 PPP1R14DQ9NXH3 145 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 KCND2Q9NZV8 630 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 MPP6Q9NZW5 540 aa4.77□□□□□ -1.65
UBR1-205ENST00000564540 KIF26BQ2KJY2 2108 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 HLA-DOBP13765 273 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 MAOAP21397 527 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 TAF1P21675 1872 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 KCNA5P22460 613 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 ABCD3P28288 659 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 PAFAH1B1P43034 410 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 METAP2P50579 478 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBR1-205ENST00000564540 TROAPQ12815 778 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 RGMBQ6NW40 437 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 KRBA2Q6ZNG9 492 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 SLC9B2Q86UD5 537 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 HEATR4Q86WZ0 1026 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 ZNF34Q8IZ26 560 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 BBS10Q8TAM1 723 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 LNX1Q8TBB1 728 aaPredicted RBP4.76□□□□□ -1.65
UBR1-205ENST00000564540 SLC20A1Q8WUM9 679 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 FEM1CQ96JP0 617 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 EPYCQ99645 322 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 MMP25Q9NPA2 562 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 HINT3Q9NQE9 182 aaKnown RBP4.76□□□□□ -1.65
UBR1-205ENST00000564540 SARDHQ9UL12 918 aa4.76□□□□□ -1.65
UBR1-205ENST00000564540 LRRFIP2Q9Y608 721 aaKnown RBP4.76□□□□□ -1.65
UBR1-205ENST00000564540 A0A1W2PQM1 296 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 TNFSF14O43557 240 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 ITGA2P17301 1181 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 TMPOP42166 694 aaKnown RBP4.75□□□□□ -1.65
UBR1-205ENST00000564540 CLCNKAP51800 687 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 HNRNPH2P55795 449 aaKnown RBP4.75□□□□□ -1.65
UBR1-205ENST00000564540 PTP4A2Q12974 167 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 NAE1Q13564 534 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 RBBP5Q15291 538 aaKnown RBP4.75□□□□□ -1.65
UBR1-205ENST00000564540 ZRSR2Q15696 482 aaKnown RBP4.75□□□□□ -1.65
UBR1-205ENST00000564540 ALG11Q2TAA5 492 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 COL28A1Q2UY09 1125 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 GFRALQ6UXV0 394 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 SLC46A3Q7Z3Q1 461 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 WDR63Q8IWG1 891 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 CIARTQ8N365 385 aaPredicted RBP4.75□□□□□ -1.65
UBR1-205ENST00000564540 ESX1Q8N693 406 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 LMNTD1Q8N9Z9 388 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 CADM4Q8NFZ8 388 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 ST8SIA4Q92187 359 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 CMKLR1Q99788 373 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 KRTAP4-4Q9BYR3 166 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 PCDH9Q9HC56 1237 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 MCM9Q9NXL9 1143 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 ERVK-11Q9UQG0 969 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms