RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 RPGRIP1Q96KN7 1286 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SERPINB11Q96P15 392 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SLC2A13Q96QE2 648 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 GCNAQ96QF7 691 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 OSBPL9Q96SU4 736 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 TBCBQ99426 244 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 ELF4Q99607 663 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 CDCA3Q99618 268 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 TTLL2Q9BWV7 592 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 TLR10Q9BXR5 811 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 NACA2Q9H009 215 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CARD9Q9H257 536 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 MTG2Q9H4K7 406 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 FAM204AQ9H8W3 233 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 ZWILCHQ9H900 591 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 RRAGDQ9NQL2 400 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.76□□□□□ -1.651e-6■■■□□ 17
CDR2-203ENST00000563573 CLIC5Q9NZA1 410 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 COX16Q9P0S2 106 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 USP36Q9P275 1121 aaKnown RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 NCDNQ9UBB6 729 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 PCSK1NQ9UHG2 260 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CDC23Q9UJX2 597 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 USP18Q9UMW8 372 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 PACSIN2Q9UNF0 486 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 NAALADL1Q9UQQ1 740 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 YIPF1Q9Y548 306 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 INSL5Q9Y5Q6 135 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 RANBP2P49792 3224 aaKnown RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 ANAPC1Q9H1A4 1944 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 GOLGA6L10A0A0M3HER8 536 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CCDC195A0A1B0GUA6 201 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 FAM92AA1XBS5 289 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 ZNF197O14709 1029 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 PER2O15055 1255 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 OPHN1O60890 802 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 SRGAP2O75044 1071 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 LRCH4O75427 683 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 TJP3O95049 919 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CSPG5O95196 566 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 APOL3O95236 402 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 SLU7O95391 586 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 VNN2O95498 520 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 FYNP06241 537 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 ATF6P18850 670 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 KDELR1P24390 212 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 MIPP30301 263 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CDC25CP30307 473 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CCR1P32246 355 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CXCR5P32302 372 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 RDXP35241 583 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 GJC1P36383 396 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 ZNF135P52742 658 aaPredicted RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 TBX4P57082 545 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 NANOS3P60323 173 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 COG7P83436 770 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 OGDHQ02218 1023 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 LRRC32Q14392 662 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 KRT81Q14533 505 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 PDK2Q15119 407 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 ARHGAP15Q53QZ3 475 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 BRMS1LQ5PSV4 323 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 C10orf120Q5SQS8 335 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 LY6G5CQ5SRR4 150 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 SNX30Q5VWJ9 437 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 SYPL2Q5VXT5 272 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 LRRC31Q6UY01 552 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 SCD5Q86SK9 330 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 RBM23Q86U06 439 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 PSTKQ8IV42 348 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 UNC45BQ8IWX7 931 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 KATNAL2Q8IYT4 538 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 UNC5BQ8IZJ1 945 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 LEMD2Q8NC56 503 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 ACTRT1Q8TDG2 376 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 TEKT4Q8WW24 435 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 HSPH1Q92598 858 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 MRPS31Q92665 395 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 CASP10Q92851 521 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CD101Q93033 1021 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 NT5C3BQ969T7 300 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 MRPL38Q96DV4 380 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 PIWIL1Q96J94 861 aaKnown RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 CAPZA3Q96KX2 299 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 PSMB7Q99436 277 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 NPY6RQ99463 290 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 TRIM7Q9C029 511 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 DCLK3Q9C098 648 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 GOLPH3Q9H4A6 298 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 PRDM16Q9HAZ2 1276 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 MAN1C1Q9NR34 630 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 ASAH2Q9NR71 780 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 HOMER3Q9NSC5 361 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 TMEM30AQ9NV96 361 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.75□□□□□ -1.65
CDR2-203ENST00000563573 OXSMQ9NWU1 459 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 DDIT4Q9NX09 232 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 ZDHHC7Q9NXF8 308 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 GPRC5BQ9NZH0 403 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms