RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 USP27XA6NNY8 438 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ANKRD66B4E2M5 251 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 H0Y8X5 98 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 H7C0C1 242 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 TLR4O00206 839 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 PSMD11O00231 422 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 KCNK3O14649 394 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 LILRA1O75019 489 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ZNF189O75820 626 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 NEBLO76041 1014 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 MT-CYBP00156 380 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ZNF883P0CG24 379 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 C6P13671 934 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 NFKB1P19838 968 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 AKT2P31751 481 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ATP5OP48047 213 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 NXPH1P58417 271 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 PFN3P60673 137 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 FAM193AP78312 1265 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SEMG2Q02383 582 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SGCGQ13326 291 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SIX1Q15475 284 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 OASLQ15646 514 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 CDKN3Q16667 212 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ZNF423Q2M1K9 1284 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 HLA-BQ31612 363 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SEL1L2Q5TEA6 688 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 IL27RAQ6UWB1 636 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 KYAT3Q6YP21 454 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 DBX2Q6ZNG2 339 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SPATS2Q86XZ4 545 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 CDKL3Q8IVW4 592 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 KLHDC8BQ8IXV7 354 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 RAVER1Q8IY67 606 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 MINDY1Q8N5J2 469 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 TP53I13Q8NBR0 393 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SPATA22Q8NHS9 363 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 PDCD6IPQ8WUM4 868 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 RMDN1Q96DB5 314 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 OXNAD1Q96HP4 312 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 COQ10AQ96MF6 247 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SMIM14Q96QK8 99 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 RBM15Q96T37 977 aaKnown RBP eCLIP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 GORASP1Q9BQQ3 440 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 WRAP53Q9BUR4 548 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ERVMER34-1Q9H9K5 563 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 PCDH9Q9HC56 1237 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 FZD3Q9NPG1 666 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 AASDHPPTQ9NRN7 309 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SEPT10Q9P0V9 454 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 PYCARDQ9ULZ3 195 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 CHKBQ9Y259 395 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SNX11Q9Y5W9 270 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 LOC285095A0A1B0GVY8 99 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 C5orf60A6NFR6 353 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 CAPN8A6NHC0 703 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 C4orf47A7E2U8 309 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 HEXIM1O94992 359 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 EPOP01588 193 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ALPIP09923 528 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 BMP2P12643 396 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 CA4P22748 312 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 NFKBIAP25963 317 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 VIPR1P32241 457 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 HNF1BP35680 557 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 CLDN2P57739 230 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SLC14A1Q13336 389 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 PTPRRQ15256 657 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 CNGA3Q16281 694 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 RSPO4Q2I0M5 234 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 WSCD2Q2TBF2 565 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ANKRD20A2Q5SQ80 823 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ANKRD20A1Q5TYW2 823 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 ANKRD20A3Q5VUR7 823 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 KDELC1Q6UW63 502 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 PID1Q7Z2X4 250 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SLC22A18ASQ8N1D0 253 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 LINC00528Q8N1L1 170 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 OR13H1Q8NG92 308 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 OR2I1PQ8NGU4 316 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SREK1Q8WXA9 508 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 SKA1Q96BD8 255 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 RTP4Q96DX8 246 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 MYOCQ99972 504 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 FRMD8P1Q9BZ68 369 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 GAREM1Q9H706 876 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 IL21RQ9HBE5 538 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 MBNL1Q9NR56 388 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 KCND1Q9NSA2 647 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 TRMT1Q9NXH9 659 aaKnown RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 KLHL8Q9P2G9 620 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-204ENST00000563130 FAM153AQ9UHL3 310 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 DNPEPQ9ULA0 475 aa6.2□□□□□ -1.42
CNOT1-204ENST00000563130 A0A1B0GTQ1 180 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 A6NNZ2 444 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 A8MX80 341 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TOR1BO14657 336 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ENC1O14682 589 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 FPGTO14772 594 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms