RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 BIRC2Q13490 618 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 SEMA5AQ13591 1074 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 HLTFQ14527 1009 aaKnown RBP eCLIP5.36□□□□□ -1.55
HERC1-213ENST00000561359 ALG11Q2TAA5 492 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 ZNF394Q53GI3 561 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 RAB41Q5JT25 222 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 SPOPLQ6IQ16 392 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 SEZ6L2Q6UXD5 910 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 CEACAM20Q6UY09 585 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 LINGO4Q6UY18 593 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 STXBP4Q6ZWJ1 553 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 BHLHA9Q7RTU4 235 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 ZSCAN30Q86W11 494 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 CHSY1Q86X52 802 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 CIR1Q86X95 450 aaPredicted RBP5.36□□□□□ -1.55
HERC1-213ENST00000561359 APLFQ8IW19 511 aaPredicted RBP5.36□□□□□ -1.55
HERC1-213ENST00000561359 SFTPA2Q8IWL1 248 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 SIX6OS1Q8N1H7 587 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 SH2D3CQ8N5H7 860 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 CISD2Q8N5K1 135 aaKnown RBP5.36□□□□□ -1.55
HERC1-213ENST00000561359 ESX1Q8N693 406 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 Q8NA96 180 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 FAM184AQ8NB25 1140 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 ATP11CQ8NB49 1132 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 GLIS1Q8NBF1 620 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 CHST14Q8NCH0 376 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 OR2A12Q8NGT7 310 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 AZIN2Q96A70 460 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 HDAC11Q96DB2 347 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 SNRNP40Q96DI7 357 aaKnown RBP5.36□□□□□ -1.55
HERC1-213ENST00000561359 RANBP9Q96S59 729 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 PPP1R9BQ96SB3 815 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 UBXN6Q9BZV1 441 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 SPRY4Q9C004 299 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 DPEP2Q9H4A9 486 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 C12orf49Q9H741 205 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 LRRC4Q9HBW1 653 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 ABCC13Q9NSE7 274 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 COPG2Q9UBF2 871 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 FAM8A1Q9UBU6 413 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 CCDC39Q9UFE4 941 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 ZNF451Q9Y4E5 1061 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 FADS3Q9Y5Q0 445 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 CROCCQ5TZA2 2017 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 COL6A5A8TX70 2615 aa5.36□□□□□ -1.55
HERC1-213ENST00000561359 ZSCAN5CA6NGD5 496 aaPredicted RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 RNF103O00237 685 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 PAX4O43316 350 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 TSPAN6O43657 245 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 AP1G1O43747 822 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 PRICKLE3O43900 615 aaPredicted RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 ENDOD1O94919 500 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 VNN1O95497 513 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 MT-CO1P00395 513 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 RPN1P04843 607 aaKnown RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 BPIP17213 487 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 CAPN3P20807 821 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 RRM1P23921 792 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 NFKBIAP25963 317 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 HTR1BP28222 390 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 CD1CP29017 333 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 CASP14P31944 242 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 PLK1P53350 603 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 AP3M2P53677 418 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 ITGA1P56199 1179 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 SRP54P61011 504 aaKnown RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 INCA1Q0VD86 236 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 CHAF1BQ13112 559 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 LRRC14Q15048 493 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 CLPPQ16740 277 aaPredicted RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 RILPL1Q5EBL4 403 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 SNAP47Q5SQN1 464 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 NKAIN2Q5VXU1 208 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 RAP1GAP2Q684P5 730 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 SLC6A19Q695T7 634 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 SPECC1LQ69YQ0 1117 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 MSANTD2Q6P1R3 559 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 ENPP7Q6UWV6 458 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 SV2BQ7L1I2 683 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 IQCKQ8N0W5 287 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 CCAR2Q8N163 923 aaKnown RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 XXYLT1Q8NBI6 393 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 OR4D9Q8NGE8 314 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 PNPLA2Q96AD5 504 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 CENPTQ96BT3 561 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 DNAJC19Q96DA6 116 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 RNF31Q96EP0 1072 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 ZPBPQ9BS86 351 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 FEM1AQ9BSK4 669 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 C1QTNF7Q9BXJ2 289 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 ACSS2Q9NR19 701 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 PANK4Q9NVE7 773 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 KLQ9UEF7 1012 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 ZC3H7BQ9UGR2 993 aaKnown RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 IL36AQ9UHA7 158 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 XPO7Q9UIA9 1087 aaKnown RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 VPS28Q9UK41 221 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 TMEM184BQ9Y519 407 aaPredicted RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 PCDHGA9Q9Y5G4 932 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms