RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TEAD1P28347 426 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 CSNK1EP49674 416 aaKnown RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 GRIK2Q13002 908 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 PTK2BQ14289 1009 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 SF3A2Q15428 464 aaKnown RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 KIAA2013Q8IYS2 634 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 NRSN1Q8IZ57 195 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 CBARPQ8N350 705 aaPredicted RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 LPCAT1Q8NF37 534 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 ATL2Q8NHH9 583 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 RMDN1Q96DB5 314 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 KLF6Q99612 283 aaPredicted RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 C19orf43Q9BQ61 176 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 TMEM121Q9BTD3 319 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 LRRC1Q9BTT6 524 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 WRAP53Q9BUR4 548 aaKnown RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 GPR27Q9NS67 375 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 DNAAF2Q9NVR5 837 aaKnown RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 GGT7Q9UJ14 662 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 ZNF148Q9UQR1 794 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 R3HDM2Q9Y2K5 976 aaKnown RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 PCDHGB2Q9Y5G2 931 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 EP300Q09472 2414 aaPredicted RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 TCRBV7S2A1N4TA0A589 114 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 NPIPB15A6NHN6 443 aaPredicted RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 WNT9AO14904 365 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 MT-CYBP00156 380 aaPredicted RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 FGF1P05230 155 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 CTSKP43235 329 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 ARRB1P49407 418 aaPredicted RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 NXPH1P58417 271 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 PFN3P60673 137 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 DPTQ07507 201 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 MTM1Q13496 603 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 FGL2Q14314 439 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 SIX1Q15475 284 aaPredicted RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 CCDC6Q16204 474 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 CNGA3Q16281 694 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 QPCTQ16769 361 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 GLE1Q53GS7 698 aaKnown RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 LRRC73Q5JTD7 316 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 KDELC1Q6UW63 502 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 GCNT7Q6ZNI0 430 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 ZNF765Q7L2R6 523 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 FAM71DQ8N9W8 422 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 TP53I13Q8NBR0 393 aaPredicted RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 SPATA22Q8NHS9 363 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 COQ10AQ96MF6 247 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 FAM53CQ9NYF3 392 aa14□□□□□ -0.17
PKNOX1-209ENST00000560448 DYNC1LI1Q9Y6G9 523 aaKnown RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 PTPRZ1P23471 2315 aaPredicted RBP14□□□□□ -0.17
PKNOX1-209ENST00000560448 A0A1B0GVT2 93 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 PPFIA2O75334 1257 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 PMPCBO75439 489 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 RECQL5O94762 991 aaPredicted RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 SEC31AO94979 1220 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 HOXC4P09017 264 aaPredicted RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 THEGLP0DJG4 465 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 TSHRP16473 764 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 LHCGRP22888 699 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 KELP23276 732 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 HNF1BP35680 557 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 FDFT1P37268 417 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 RXRGP48443 463 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 WNT3AP56704 352 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 IHHQ14623 411 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 SUZ12Q15022 739 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 ZNF423Q2M1K9 1284 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 KIF19Q2TAC6 998 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 BEND6Q5SZJ8 279 aaPredicted RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 ZDHHC20Q5W0Z9 365 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 LRRC66Q68CR7 880 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 TCEAL6Q6IPX3 200 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 ESRP1Q6NXG1 681 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 CRTC1Q6UUV9 634 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 B4GALNT4Q76KP1 1039 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 MINDY1Q8N5J2 469 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 CCDC89Q8N998 374 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 CCDC110Q8TBZ0 833 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 TCEAL3Q969E4 200 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 DTD2Q96FN9 168 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 ELF4Q99607 663 aaPredicted RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 FAM118BQ9BPY3 351 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 PKD2L2Q9NZM6 624 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 PAK5Q9P286 719 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 NFKBIL1Q9UBC1 381 aaPredicted RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 DMGDHQ9UI17 866 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 CDV3Q9UKY7 258 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 GVINP1Q7Z2Y8 2422 aa13.99□□□□□ -0.17
PKNOX1-209ENST00000560448 C1orf232A0A0U1RR37 186 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ATP8B1O43520 1251 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ITIH2P19823 946 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 MCM3P25205 808 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PSMB4P28070 264 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 HTR1BP28222 390 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms