RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 ASCL5Q7RTU5 278 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 GSTA5Q7RTV2 222 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 LYSMD3Q7Z3D4 306 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 TMC3Q7Z5M5 1100 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 SLC25A41Q8N5S1 370 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 CCDC89Q8N998 374 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 NAT8LQ8N9F0 302 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 LRRN4CLQ8ND94 238 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 KIF18AQ8NI77 898 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 FOXJ1Q92949 421 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 LOXL4Q96JB6 756 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 BMFQ96LC9 184 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 SLC6A18Q96N87 628 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 LENG8Q96PV6 779 aaPredicted RBP9.05□□□□□ -0.96
HMG20A-209ENST00000559728 KRT12Q99456 494 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 TBL1YQ9BQ87 522 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 FERMT1Q9BQL6 677 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 TRIM51Q9BSJ1 452 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 ADGRE3Q9BY15 652 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 SLC17A9Q9BYT1 436 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 IRF2BPLQ9H1B7 796 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 CAAP1Q9H8G2 361 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 LRRC40Q9H9A6 602 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 L2HGDHQ9H9P8 463 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 MAGEE1Q9HCI5 957 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 TM9SF3Q9HD45 589 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 FZD3Q9NPG1 666 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 EIF2B3Q9NR50 452 aaKnown RBP9.05□□□□□ -0.96
HMG20A-209ENST00000559728 GPR27Q9NS67 375 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 PIH1D1Q9NWS0 290 aaKnown RBP9.05□□□□□ -0.96
HMG20A-209ENST00000559728 EIF2B4Q9UI10 523 aaKnown RBP9.05□□□□□ -0.96
HMG20A-209ENST00000559728 ZNF711Q9Y462 761 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 KCTD3Q9Y597 815 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 PLXND1Q9Y4D7 1925 aa9.05□□□□□ -0.96
HMG20A-209ENST00000559728 ATXN2Q99700 1313 aaKnown RBP9.05□□□□□ -0.96
HMG20A-209ENST00000559728 POM121BA6NF01 834 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 ERI2A8K979 691 aaKnown RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PATE3B3GLJ2 98 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 H0Y8X5 98 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PSMD11O00231 422 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 GAPDHSO14556 408 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 SLC31A1O15431 190 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 FGF1P05230 155 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 TPH1P17752 444 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 TPSB2P20231 275 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 CA4P22748 312 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 XPAP23025 273 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PSMA3P25788 255 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 CA5AP35218 305 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 IGFALSP35858 605 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 ETV3P41162 512 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 DHPSP49366 369 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 CLDN2P57739 230 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 DR1Q01658 176 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 LMNB2Q03252 620 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PRPSAP1Q14558 356 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PTPRCAPQ14761 206 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 TRADDQ15628 312 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 TPSAB1Q15661 275 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 ELF2Q15723 593 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 CFAP58Q5T655 872 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 RNASEH2BQ5TBB1 312 aaKnown RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 LAIR1Q6GTX8 287 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 LAYNQ6UX15 382 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 Q6ZVL8 140 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 ABI3BPQ7Z7G0 1075 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 CAND1Q86VP6 1230 aaKnown RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 NOA1Q8NC60 698 aaKnown RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PLA2G15Q8NCC3 412 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 OR52K1Q8NGK4 314 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 CXorf40AQ8TE69 158 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 RMDN1Q96DB5 314 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 DTD2Q96FN9 168 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 IFT43Q96FT9 208 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PPP1R2P1Q96PQ5 205 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 AGAP2Q99490 1192 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 SEMA4AQ9H3S1 761 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 SMOC1Q9H4F8 434 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PARD6AQ9NPB6 346 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 IL17CQ9P0M4 197 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 PNMA8BQ9ULN7 279 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-209ENST00000559728 SHOC2Q9UQ13 582 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 ABCA7Q8IZY2 2146 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 FANCMQ8IYD8 2048 aa9.04□□□□□ -0.96
HMG20A-209ENST00000559728 SHROOM3Q8TF72 1996 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 C1orf232A0A0U1RR37 186 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 MROH6A6NGR9 719 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 K7ESM1 405 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 NEMP1O14524 444 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 DNALI1O14645 258 aaPredicted RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 PSMD3O43242 534 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 LDB2O43679 373 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 BUD23O43709 281 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 TM7SF2O76062 418 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 GAS8O95995 478 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 LMNAP02545 664 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 APRTP07741 180 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 RETP07949 1114 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 ELFN1P0C7U0 828 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 CYP2A6P11509 494 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms