RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SEPT5Q99719 369 aaPredicted RBP11.26□□□□□ -0.61
CASC4-208ENST00000559151 FZD3Q9NPG1 666 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 MKKSQ9NPJ1 570 aaPredicted RBP11.26□□□□□ -0.61
CASC4-208ENST00000559151 TUBA8Q9NY65 449 aaPredicted RBP11.26□□□□□ -0.61
CASC4-208ENST00000559151 SEC63Q9UGP8 760 aaKnown RBP11.26□□□□□ -0.61
CASC4-208ENST00000559151 STON1Q9Y6Q2 735 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 AKR1B15C9JRZ8 316 aaPredicted RBP11.25□□□□□ -0.61
CASC4-208ENST00000559151 VCYO14598 125 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 NDUFB4O95168 129 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 FTCDO95954 541 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 TFAP4Q01664 338 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 DCAF6Q58WW2 860 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 RPUSD3Q6P087 351 aaKnown RBP11.25□□□□□ -0.61
CASC4-208ENST00000559151 PQLC2Q6ZP29 291 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 KBTBD6Q86V97 674 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 C16orf52Q8NHV5 167 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 ABHD1Q96SE0 405 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 ESRP2Q9H6T0 727 aaKnown RBP11.25□□□□□ -0.61
CASC4-208ENST00000559151 GIMAP4Q9NUV9 329 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 MORF4L1Q9UBU8 362 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 FAM169AQ9Y6X4 670 aa11.25□□□□□ -0.61
CASC4-208ENST00000559151 KDM4EB2RXH2 506 aaPredicted RBP11.24□□□□□ -0.61
CASC4-208ENST00000559151 ALDH7A1P49419 539 aaKnown RBP11.24□□□□□ -0.61
CASC4-208ENST00000559151 RRP1P56182 461 aaKnown RBP11.24□□□□□ -0.61
CASC4-208ENST00000559151 RBMS2Q15434 407 aaKnown RBP11.24□□□□□ -0.61
CASC4-208ENST00000559151 TMEM266Q2M3C6 531 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 WASHC2DQ5SRD0 308 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 GARNL3Q5VVW2 1013 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 PLEKHA7Q6IQ23 1121 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 DPPA4Q7L190 304 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 TRAPPC11Q7Z392 1133 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 CTU1Q7Z7A3 348 aaKnown RBP11.24□□□□□ -0.61
CASC4-208ENST00000559151 KCTD6Q8NC69 237 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 GAD1Q99259 594 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 ISCUQ9H1K1 167 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 CLK4Q9HAZ1 481 aaKnown RBP11.24□□□□□ -0.61
CASC4-208ENST00000559151 SIRT3Q9NTG7 399 aaPredicted RBP11.24□□□□□ -0.61
CASC4-208ENST00000559151 PADI1Q9ULC6 663 aa11.24□□□□□ -0.61
CASC4-208ENST00000559151 I6L893 689 aaPredicted RBP11.23□□□□□ -0.61
CASC4-208ENST00000559151 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
CASC4-208ENST00000559151 RASSF2P50749 326 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 ZBED6P86452 979 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
CASC4-208ENST00000559151 CCDC96Q2M329 555 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 ODF3L2Q3SX64 289 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 DCAF12L2Q5VW00 463 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 PRPF31Q8WWY3 499 aaKnown RBP11.23□□□□□ -0.61
CASC4-208ENST00000559151 CCDC34Q96HJ3 373 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 HRH4Q9H3N8 390 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 HINT3Q9NQE9 182 aaKnown RBP11.23□□□□□ -0.61
CASC4-208ENST00000559151 TMEM51Q9NW97 253 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 WSB2Q9NYS7 404 aaPredicted RBP11.23□□□□□ -0.61
CASC4-208ENST00000559151 CWC15Q9P013 229 aaKnown RBP11.23□□□□□ -0.61
CASC4-208ENST00000559151 CMAHPQ9Y471 501 aa11.23□□□□□ -0.61
CASC4-208ENST00000559151 PAPSS1O43252 624 aaPredicted RBP11.22□□□□□ -0.61
CASC4-208ENST00000559151 JRKO75564 520 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 GNLYP22749 145 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 TAS2R40P59535 323 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 MYBPC2Q14324 1141 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 EZH2Q15910 746 aaKnown RBP11.22□□□□□ -0.61
CASC4-208ENST00000559151 MTX3Q5HYI7 312 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 TMEM198Q66K66 360 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 ARFGAP1Q8N6T3 406 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 ZNF548Q8NEK5 533 aaPredicted RBP11.22□□□□□ -0.61
CASC4-208ENST00000559151 PIGOQ8TEQ8 1089 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 LPAR1Q92633 364 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 ACOX2Q99424 681 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 PAFAH2Q99487 392 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 PCGF1Q9BSM1 259 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 KLHL4Q9C0H6 718 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 NDST4Q9H3R1 872 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 LTB4R2Q9NPC1 389 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 SRPRBQ9Y5M8 271 aaKnown RBP11.22□□□□□ -0.61
CASC4-208ENST00000559151 CLIC4Q9Y696 253 aa11.22□□□□□ -0.61
CASC4-208ENST00000559151 DKC1O60832 514 aaKnown RBP eCLIP11.21□□□□□ -0.61
CASC4-208ENST00000559151 PRF1P14222 555 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 ANXA7P20073 488 aaKnown RBP11.21□□□□□ -0.61
CASC4-208ENST00000559151 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.61
CASC4-208ENST00000559151 MANEAQ5SRI9 462 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 MON1BQ7L1V2 547 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 MPLKIPQ8TAP9 179 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 RADILQ96JH8 1075 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 APOL6Q9BWW8 343 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 GIMAP2Q9UG22 337 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 HS3ST3B1Q9Y662 390 aa11.21□□□□□ -0.61
CASC4-208ENST00000559151 GLOD5A6NK44 160 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 ATP2A1O14983 1001 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 MITFO75030 526 aaPredicted RBP11.2□□□□□ -0.62
CASC4-208ENST00000559151 ACADLP28330 430 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 EIF2S3P41091 472 aaKnown RBP11.2□□□□□ -0.62
CASC4-208ENST00000559151 HMGA2P52926 109 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 MRPS5P82675 430 aaKnown RBP11.2□□□□□ -0.62
CASC4-208ENST00000559151 GPR18Q14330 331 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 NEDD9Q14511 834 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms