RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 USP45Q70EL2 814 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 GSTA5Q7RTV2 222 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 CYP2U1Q7Z449 544 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 TMC3Q7Z5M5 1100 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 C11orf74Q86VG3 221 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 SPATS2Q86XZ4 545 aaKnown RBP10.9□□□□□ -0.66
TPM1-217ENST00000559108 JAMLQ86YT9 394 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 SYT12Q8IV01 421 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 PAF1Q8N7H5 531 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 NOA1Q8NC60 698 aaKnown RBP10.9□□□□□ -0.66
TPM1-217ENST00000559108 CXorf40AQ8TE69 158 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 PTCD2Q8WV60 388 aaKnown RBP10.9□□□□□ -0.66
TPM1-217ENST00000559108 FOXJ1Q92949 421 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 SCAMP4Q969E2 229 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 DTD2Q96FN9 168 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 IFT43Q96FT9 208 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 NAP1L3Q99457 506 aaPredicted RBP10.9□□□□□ -0.66
TPM1-217ENST00000559108 TRIM56Q9BRZ2 755 aaKnown RBP10.9□□□□□ -0.66
TPM1-217ENST00000559108 ARNT2Q9HBZ2 717 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 CAPN10Q9HC96 672 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 CASS4Q9NQ75 786 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 GPR27Q9NS67 375 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 HOMER3Q9NSC5 361 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 TMPRSS11EQ9UL52 423 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 ARIH1Q9Y4X5 557 aaPredicted RBP10.9□□□□□ -0.66
TPM1-217ENST00000559108 BPTFQ12830 3046 aa10.9□□□□□ -0.66
TPM1-217ENST00000559108 KNL1Q8NG31 2342 aa10.9□□□□□ -0.67
TPM1-217ENST00000559108 EP300Q09472 2414 aaPredicted RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 LAMA1P25391 3075 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 DNAH14Q0VDD8 3507 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 C1orf232A0A0U1RR37 186 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 A0A1B0GVT2 93 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 A0A1W2PQ67 120 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 FADS2P1A8MWK0 482 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 CCDC188H7C350 402 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 CCL22O00626 93 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 GAPDHSO14556 408 aaPredicted RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 RAD51CO43502 376 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 LDB2O43679 373 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 ZNF500O60304 480 aaPredicted RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 AVILO75366 819 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 TM7SF2O76062 418 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 ECEL1O95672 775 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 FGF1P05230 155 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 APRTP07741 180 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 HLA-DPA1P20036 260 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 FDFT1P37268 417 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 CSNK1EP49674 416 aaKnown RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 EPHB1P54762 984 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 IRX4P78413 519 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 BASP1P80723 227 aaKnown RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 SFSWAPQ12872 951 aaKnown RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 ACOX1Q15067 660 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 SETMARQ53H47 684 aaPredicted RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 CERCAMQ5T4B2 595 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 RGL4Q8IZJ4 473 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 NAT8LQ8N9F0 302 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 GPR26Q8NDV2 337 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 OR13H1Q8NG92 308 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 BLOC1S5Q8TDH9 187 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 ASB12Q8WXK4 309 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 LOXL4Q96JB6 756 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 SERAC1Q96JX3 654 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 PWWP2AQ96N64 755 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 HINFPQ9BQA5 517 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 FSD1LQ9BXM9 530 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 ADGRE3Q9BY15 652 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 IRF2BPLQ9H1B7 796 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 ABCG8Q9H221 673 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 SEMA4AQ9H3S1 761 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 LRRC40Q9H9A6 602 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 MAGEE1Q9HCI5 957 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 BPIFA1Q9NP55 256 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 HAUS2Q9NVX0 235 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 AAR2Q9Y312 384 aaKnown RBP10.89□□□□□ -0.67
TPM1-217ENST00000559108 ARL5AQ9Y689 179 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 GVINP1Q7Z2Y8 2422 aa10.89□□□□□ -0.67
TPM1-217ENST00000559108 GOLGA6L10A0A0M3HER8 536 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 LNP1A1A4G5 178 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 CCDC78A2IDD5 438 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 ESPNB1AK53 854 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 BCAT2O15382 392 aaPredicted RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 PCCBP05166 539 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 RETP07949 1114 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 CYP2A6P11509 494 aaPredicted RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 BPIP17213 487 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 TPSB2P20231 275 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 HNRNPA2B1P22626 353 aaKnown RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 CA4P22748 312 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 SPINT3P49223 89 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 ZNF140P52738 457 aaPredicted RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 PFN3P60673 137 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 CRADDP78560 199 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 DR1Q01658 176 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 PRPSAP1Q14558 356 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 SHBQ15464 509 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 TPSAB1Q15661 275 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 KIF19Q2TAC6 998 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 CCDC38Q502W7 563 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms