RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 C1orf54Q8WWF1 131 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 OXNAD1Q96HP4 312 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-205ENST00000558428 COQ10AQ96MF6 247 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 TMEM121Q9BTD3 319 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 FRMD8P1Q9BZ68 369 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-205ENST00000558428 ERVMER34-1Q9H9K5 563 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 GOLGA4Q13439 2230 aaKnown RBP12.36□□□□□ -0.43
SMAD3-205ENST00000558428 ARID1BQ8NFD5 2236 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-205ENST00000558428 C1orf232A0A0U1RR37 186 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 DCDC2BA2VCK2 349 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 C5orf60A6NFR6 353 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 TOR1BO14657 336 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 TM4SF5O14894 197 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 YKT6O15498 198 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 LIASO43766 372 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 CLDN7O95471 211 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 ATP1A1P05023 1023 aaKnown RBP12.36□□□□□ -0.43
SMAD3-205ENST00000558428 CD59P13987 128 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 ETV3P41162 512 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 THOP1P52888 689 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 GDF10P55107 478 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 YPEL5P62699 121 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 PTSQ03393 145 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 MTM1Q13496 603 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 SNX1Q13596 522 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 PTK2BQ14289 1009 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 PRPSAP1Q14558 356 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 INPP5AQ14642 412 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 LONRF2Q1L5Z9 754 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 ARHGEF18Q6ZSZ5 1173 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 Q6ZVL8 140 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 CBARPQ8N350 705 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-205ENST00000558428 PLA2G15Q8NCC3 412 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 DTD2Q96FN9 168 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 MRGPRX2Q96LB1 330 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 LYSMD1Q96S90 227 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 GPR27Q9NS67 375 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 KCTD5Q9NXV2 234 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 ZNF148Q9UQR1 794 aa12.36□□□□□ -0.43
SMAD3-205ENST00000558428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMAD3-205ENST00000558428 SPTY2D1-AS1A0A0U1RR47 76 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 LOC285095A0A1B0GVY8 99 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 GOLGA6CA6NDK9 693 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 GOLGA6BA6NDN3 693 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 SH3BP5O60239 455 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 SLC4A1P02730 911 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 C1SP09871 688 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 PIRTP0C851 137 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 GOLGA6DP0CG33 693 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 KCNA4P22459 653 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 RXRGP48443 463 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 STC1P52823 247 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 FZD2Q14332 565 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 SUZ12Q15022 739 aaKnown RBP12.35□□□□□ -0.43
SMAD3-205ENST00000558428 SHBQ15464 509 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 SIX1Q15475 284 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-205ENST00000558428 OASLQ15646 514 aaKnown RBP12.35□□□□□ -0.43
SMAD3-205ENST00000558428 TPRG1LQ5T0D9 272 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 ESRP1Q6NXG1 681 aaKnown RBP12.35□□□□□ -0.43
SMAD3-205ENST00000558428 TECPR1Q7Z6L1 1165 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 PARGQ86W56 976 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 SLC25A41Q8N5S1 370 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 PBKQ96KB5 322 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 PPP1R2P1Q96PQ5 205 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 GORASP1Q9BQQ3 440 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 APOOQ9BUR5 198 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 GOLGA6AQ9NYA3 693 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 CD84Q9UIB8 345 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 SHOC2Q9UQ13 582 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 AAR2Q9Y312 384 aaKnown RBP12.35□□□□□ -0.43
SMAD3-205ENST00000558428 OR1A2Q9Y585 309 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
SMAD3-205ENST00000558428 K7ESM1 405 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 FLRT2O43155 660 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 PCDHGA12O60330 932 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 SDC3O75056 442 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 GCATO75600 419 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 IFNB1P01574 187 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 EPOP01588 193 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ITGAVP06756 1048 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ATXN1LP0C7T5 689 aaKnown RBP12.34□□□□□ -0.43
SMAD3-205ENST00000558428 HLA-DPA1P20036 260 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 HTR1BP28222 390 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 EPHA8P29322 1005 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-205ENST00000558428 STIP1P31948 543 aaKnown RBP12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ACTN2P35609 894 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 CHRNA4P43681 627 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 NOVA1P51513 510 aaKnown RBP12.34□□□□□ -0.43
SMAD3-205ENST00000558428 GNG11P61952 73 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 BNIP3Q12983 259 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 NFATC4Q14934 902 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 SLC1A5Q15758 541 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 CCNG2Q16589 344 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 CDKN3Q16667 212 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 PARP6Q2NL67 630 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ZNF542PQ5EBM4 170 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 RAET1GQ6H3X3 334 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms