RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 PCDHA13Q9Y5I0 950 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 ZFYVE26Q68DK2 2539 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 ATXN2Q99700 1313 aaKnown RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 GAGE12BA1L429 117 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 FAM92AA1XBS5 289 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 TMEM8BA6NDV4 472 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 RNASET2O00584 256 aaKnown RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 SLC9A3R1O14745 358 aaPredicted RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 EIF3DO15371 548 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLPX-202ENST00000558103 TGFB1I1O43294 461 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 COCHO43405 550 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 HTRA2O43464 458 aaPredicted RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 TSPAN6O43657 245 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 KLF8O95600 359 aaPredicted RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 APODP05090 189 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 ADH4P08319 380 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 FAM163BP0C2L3 166 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 ENGP17813 658 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 ZFP36P26651 326 aaKnown RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 RAP2BP61225 183 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 KDSRQ06136 332 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 LMAN2Q12907 356 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 SEMA3BQ13214 749 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 SNRNP35Q16560 246 aaKnown RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 SPDYCQ5MJ68 293 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 EOGTQ5NDL2 527 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 LY6G5CQ5SRR4 150 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 EMC10Q5UCC4 262 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 SNX30Q5VWJ9 437 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 CCDC65Q8IXS2 484 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 DRC7Q8IY82 874 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 ULK2Q8IYT8 1036 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 NUP93Q8N1F7 819 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 AMER2Q8N7J2 671 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 DEFB124Q8NES8 71 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 NOC3LQ8WTT2 800 aaKnown RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 NEU4Q8WWR8 484 aaPredicted RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 OVCA2Q8WZ82 227 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 PIGKQ92643 395 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 HPS3Q969F9 1004 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 OTUB2Q96DC9 234 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 MYEOVQ96EZ4 313 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 SLITRK1Q96PX8 696 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 MMS19Q96T76 1030 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 CGRRF1Q99675 332 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 MYOCQ99972 504 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 SCNM1Q9BWG6 230 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 TEX101Q9BY14 249 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 TRIM9Q9C026 710 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 TNMDQ9H2S6 317 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 KIAA1586Q9HCI6 787 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 AKIP1Q9NQ31 210 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 AGPAT3Q9NRZ7 376 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 IL37Q9NZH6 218 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 CFAP97Q9P2B7 532 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 TBC1D14Q9P2M4 693 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 IP6K2Q9UHH9 426 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 ING1Q9UK53 422 aaPredicted RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 PILRBQ9UKJ0 227 aa6.33□□□□□ -1.4
CLPX-202ENST00000558103 LUC7L2Q9Y383 392 aaKnown RBP6.33□□□□□ -1.4
CLPX-202ENST00000558103 CACNA1GO43497 2377 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 BPTFQ12830 3046 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 UBE4BO95155 1302 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 A0A1W2PQF6 199 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 TCRBV21S2A2A0A5A6 115 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 GOLGA6CA6NDK9 693 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 GOLGA6BA6NDN3 693 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 CLDN5O00501 218 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 HOXC11O43248 304 aaPredicted RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 AKAP10O43572 662 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 TULP3O75386 442 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 RTN3O95197 1032 aaPredicted RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 SCGB1D2O95969 90 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 ZDHHC11BP0C7U3 371 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 GOLGA6DP0CG33 693 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 DLATP10515 647 aaKnown RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 MBL2P11226 248 aaPredicted RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 GABRG2P18507 467 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 TNNI1P19237 187 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PDCP20941 246 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 SYT1P21579 422 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 HOXD12P35452 270 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 GNL1P36915 607 aaPredicted RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 DPP6P42658 865 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 TNFRSF4P43489 277 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 TUBP50607 506 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 CEBPZQ03701 1054 aaKnown RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 GAD2Q05329 585 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 CYP24A1Q07973 514 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 FHL2Q14192 279 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PSMD6Q15008 389 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 SLC39A14Q15043 492 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 UAP1L1Q3KQV9 507 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PDCD4Q53EL6 469 aaKnown RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 LYSMD4Q5XG99 296 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms