RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SEC61BP60468 96 aaKnown RBP4.13□□□□□ -1.75
VRK1-207ENST00000557352 GRIK3Q13003 919 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 FAM72AQ5TYM5 149 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 IRAK1BP1Q5VVH5 260 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 FAM72DQ6L9T8 149 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 GFRALQ6UXV0 394 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 FAM72BQ86X60 149 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 TMEM219Q86XT9 240 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 EPHX4Q8IUS5 362 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 DMBX1Q8NFW5 382 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 RUFY2Q8WXA3 655 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 TBC1D20Q96BZ9 403 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 FBXL8Q96CD0 374 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 ZNF570Q96NI8 536 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 REEP2Q9BRK0 252 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 MKKSQ9NPJ1 570 aaPredicted RBP4.13□□□□□ -1.75
VRK1-207ENST00000557352 ITM2CQ9NQX7 267 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 MCM9Q9NXL9 1143 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 IL1RAPL1Q9NZN1 696 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 KIAA1456Q9P272 454 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 RCOR1Q9UKL0 485 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 RALYQ9UKM9 306 aaKnown RBP4.13□□□□□ -1.75
VRK1-207ENST00000557352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.13□□□□□ -1.75
VRK1-207ENST00000557352 SAMD9Q5K651 1589 aa4.13□□□□□ -1.75
VRK1-207ENST00000557352 APOHP02749 345 aaPredicted RBP4.12□□□□□ -1.75
VRK1-207ENST00000557352 MMP2P08253 660 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 G6PDP11413 515 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 FGF5P12034 268 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 EIF2S3P41091 472 aaKnown RBP4.12□□□□□ -1.75
VRK1-207ENST00000557352 TMPOP42166 694 aaKnown RBP4.12□□□□□ -1.75
VRK1-207ENST00000557352 TRAPPC10P48553 1259 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 LINC01547P58512 204 aaPredicted RBP4.12□□□□□ -1.75
VRK1-207ENST00000557352 EFR3AQ14156 821 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 TAF11Q15544 211 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 SGO1Q5FBB7 561 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 KCNT1Q5JUK3 1230 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 FBXO47Q5MNV8 452 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 WDR45BQ5MNZ6 344 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 TADA2BQ86TJ2 420 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 DSELQ8IZU8 1212 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 BBS10Q8TAM1 723 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 MAGEC3Q8TD91 643 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 SLC20A1Q8WUM9 679 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 PLEKHA5Q9HAU0 1116 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 TMEM30AQ9NV96 361 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 STON1Q9Y6Q2 735 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 CARMIL1Q5VZK9 1371 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 CHD1O14646 1710 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 FHAD1B1AJZ9 1412 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 CEP162Q5TB80 1403 aa4.12□□□□□ -1.75
VRK1-207ENST00000557352 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 AKR1B15C9JRZ8 316 aaPredicted RBP4.11□□□□□ -1.75
VRK1-207ENST00000557352 CAPN9O14815 690 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 EDIL3O43854 480 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 LDLRP01130 860 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 CYC1P08574 325 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 CD53P19397 219 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 FMO5P49326 533 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 VEGFCP49767 419 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 ATP12AP54707 1039 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 SLC12A1Q13621 1099 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 VEPH1Q14D04 833 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 CTF1Q16619 201 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 SLC36A4Q6YBV0 504 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 TAOK1Q7L7X3 1001 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 NFE4Q86UQ8 179 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 WDR63Q8IWG1 891 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.11□□□□□ -1.75
VRK1-207ENST00000557352 PLD5Q8N7P1 536 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 WDSUB1Q8N9V3 476 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 BEST2Q8NFU1 509 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 PPM1EQ8WY54 764 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 CCT6BQ92526 530 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 ABTB1Q969K4 478 aaPredicted RBP4.11□□□□□ -1.75
VRK1-207ENST00000557352 ELP4Q96EB1 424 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 CDCA5Q96FF9 252 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 KCNN2Q9H2S1 579 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 ZNF696Q9H7X3 374 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 TAAR2Q9P1P5 351 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 SNED1Q8TER0 1413 aa4.11□□□□□ -1.75
VRK1-207ENST00000557352 IQGAP2Q13576 1575 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 CFAP43Q8NDM7 1665 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 LILRA5A6NI73 299 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 TEX22C9J3V5 150 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 BCAT2O15382 392 aaPredicted RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 HEXAP06865 529 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 ITGA2P17301 1181 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 S1PR1P21453 382 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 CLCNKAP51800 687 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 PITX1P78337 314 aaPredicted RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 EIF2S3LQ2VIR3 472 aaKnown RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 C10orf62Q5T681 223 aaPredicted RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 RGMBQ6NW40 437 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 LINGO2Q7L985 606 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 KMT5CQ86Y97 462 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 TMTC1Q8IUR5 882 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 SLC35F3Q8IY50 421 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 ZNF34Q8IZ26 560 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 ZCCHC9Q8N567 271 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms