RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TNNT1P13805 278 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 HOXB9P17482 250 aaPredicted RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 CASTP20810 708 aaKnown RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 FOXG1P55316 489 aaPredicted RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 DUSP28Q4G0W2 176 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 ALG10Q5BKT4 473 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 ALG10BQ5I7T1 473 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 PIK3CD-AS1Q5SR53 167 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 C6orf10Q5SRN2 563 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 CES5AQ6NT32 575 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 SEPT14Q6ZU15 432 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 KLBQ86Z14 1044 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 DDIASQ8IXT1 998 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 UBALD2Q8IYN6 164 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 ADGRF3Q8IZF5 1079 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 NRACQ8N912 160 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 SMRP1Q8NCR6 262 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 SLC2A12Q8TD20 617 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 WIPF2Q8TF74 440 aaPredicted RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 AFG1LQ8WV93 481 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 POF1BQ8WVV4 589 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 TOP1MTQ969P6 601 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 MPHOSPH6Q99547 160 aaKnown RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 FAM234AQ9H0X4 552 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 PRDM8Q9NQV8 689 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 HDAC6Q9UBN7 1215 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 FEM1BQ9UK73 627 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 PCDHA12Q9UN75 941 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 LAMP3Q9UQV4 416 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 DTX4Q9Y2E6 619 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 SQORQ9Y6N5 450 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 TRANK1O15050 2925 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 SIPA1L1O43166 1804 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 CFAP47Q6ZTR5 3102 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 TPRP12270 2363 aaKnown RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 FAM90A8PA6NJQ4 464 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 CD8B2A6NJW9 211 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 F5H423 210 aaPredicted RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 RHODO00212 210 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 KINO60870 393 aaKnown RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 NDUFB10O96000 172 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 IFNA2P01563 188 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 RB1P06400 928 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 DCNP07585 359 aaKnown RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 MMP3P08254 477 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 FAM90A13PP0C7W8 464 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 FAM90A24PP0C7X0 464 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 PSG1P11464 419 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 CLCN5P51795 746 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 RCAN1P53805 252 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 FOXL2P58012 376 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 COASYQ13057 564 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 BAATQ14032 418 aaPredicted RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 GALNT3Q14435 633 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 GPNMBQ14956 572 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ZNF260Q3ZCT1 412 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 SLC9C2Q5TAH2 1124 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 PLPP4Q5VZY2 271 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 B4GALNT4Q76KP1 1039 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 IRF2BP2Q7Z5L9 587 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ANKS1BQ7Z6G8 1248 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 CAMK1DQ8IU85 385 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 CERS3Q8IU89 383 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ZNF444Q8N0Y2 327 aaPredicted RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 C9orf106Q8NAJ2 232 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 OR6Y1Q8NGX8 325 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 BICD2Q8TD16 824 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ATP2A3Q93084 1043 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ZBTB9Q96C00 473 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 C18orf8Q96DM3 657 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 RTP3Q9BQQ7 232 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 LMAN2LQ9H0V9 348 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ELAC1Q9H777 363 aaKnown RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 SLC38A10Q9HBR0 1119 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 SAYSD1Q9NPB0 183 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 GPR108Q9NPR9 543 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ADD3Q9UEY8 706 aaKnown RBP4.09□□□□□ -1.75
CHD8-212ENST00000557329 CDH22Q9UJ99 828 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ANAPC4Q9UJX5 808 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 ANGPTL2Q9UKU9 493 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 CCPG1Q9ULG6 757 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 COMMD10Q9Y6G5 202 aa4.09□□□□□ -1.75
CHD8-212ENST00000557329 FAM90A18PA6NE21 464 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 FAM90A16PA6NEW6 464 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 FAM90A9PA6NNJ1 464 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 FAM90A5PA8MXJ8 464 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 FOXO6A8MYZ6 492 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 B4DLN1 442 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 C2CD4DB7Z1M9 353 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ZNF814B7Z6K7 855 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 IKBKBO14920 756 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 MSI1O43347 362 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 PRKAB2O43741 272 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 CRYABP02511 175 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 CXCL10P02778 98 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 MMP1P03956 469 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 PTPRCP08575 1304 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 FAM90A15PP0C7V4 464 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 FAM90A14PP0C7W9 464 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ZNF286BP0CG31 522 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms