RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 VAPBO95292 243 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 CTPS1P17812 591 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 ARNTP27540 789 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 ABL2P42684 1182 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 KIR2DL1P43626 348 aaPredicted RBP23.78■■□□□ 1.4
SIX4-203ENST00000556952 CLCN5P51795 746 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 GRSF1Q12849 480 aaKnown RBP eCLIP23.78■■□□□ 1.4
SIX4-203ENST00000556952 DSG4Q86SJ6 1040 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 CNTN4Q8IWV2 1026 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 STK40Q8N2I9 435 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 TTC30BQ8N4P2 665 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 SCRN2Q96FV2 425 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 CACNA2D2Q9NY47 1150 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 IL1RAPL1Q9NZN1 696 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 SIT1Q9Y3P8 196 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 STON1Q9Y6Q2 735 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 BPTFQ12830 3046 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 SLC7A4O43246 635 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 RPP40O75818 363 aaKnown RBP23.77■■□□□ 1.4
SIX4-203ENST00000556952 EPHX1P07099 455 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 ALPIP09923 528 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 PRAMEP78395 509 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 TMED2Q15363 201 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 HSP90AA5PQ58FG0 334 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 TEDDM1Q5T9Z0 273 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 FSTL4Q6MZW2 842 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 CHPFQ8IZ52 775 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 CALML6Q8TD86 181 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 EZH1Q92800 747 aaPredicted RBP23.77■■□□□ 1.4
SIX4-203ENST00000556952 TLCD1Q96CP7 247 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 MRRFQ96E11 262 aaKnown RBP23.77■■□□□ 1.4
SIX4-203ENST00000556952 DNAJC1Q96KC8 554 aaKnown RBP23.77■■□□□ 1.4
SIX4-203ENST00000556952 CPNE1Q99829 537 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 FAM167BQ9BTA0 163 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 OGFRQ9NZT2 677 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 TXNDC16Q9P2K2 825 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 TBK1Q9UHD2 729 aa23.77■■□□□ 1.4
SIX4-203ENST00000556952 MRPS17Q9Y2R5 130 aaKnown RBP23.77■■□□□ 1.4
SIX4-203ENST00000556952 IQANK1A0A1B0GTG1 560 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 AURKAO14965 403 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 OAS2P29728 719 aaKnown RBP23.76■■□□□ 1.39
SIX4-203ENST00000556952 HNF1BP35680 557 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 HMGCLP35914 325 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 SERPINB9P50453 376 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 THOC5Q13769 683 aaKnown RBP23.76■■□□□ 1.39
SIX4-203ENST00000556952 EMC10Q5UCC4 262 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 TAOK1Q7L7X3 1001 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 LMNTD2Q8IXW0 634 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 SMIM14Q96QK8 99 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 ACOX2Q99424 681 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 GPR63Q9BZJ6 419 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 DLGAP2Q9P1A6 1054 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 PPM1HQ9ULR3 514 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 KCTD3Q9Y597 815 aa23.76■■□□□ 1.39
SIX4-203ENST00000556952 CHRNB1P11230 501 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 CNTFP26441 200 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 AVPR2P30518 371 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 HADHAP40939 763 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 UGP2Q16851 508 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 LGSNQ5TDP6 509 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 TRMT11Q7Z4G4 463 aaKnown RBP23.75■■□□□ 1.39
SIX4-203ENST00000556952 OR13C4Q8NGS5 318 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 PPP1R16AQ96I34 528 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 NELL2Q99435 816 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 OSBPL6Q9BZF3 934 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 ZFYVE1Q9HBF4 777 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 PRSS16Q9NQE7 514 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 IARS2Q9NSE4 1012 aaKnown RBP23.75■■□□□ 1.39
SIX4-203ENST00000556952 POLR3BQ9NW08 1133 aaPredicted RBP23.75■■□□□ 1.39
SIX4-203ENST00000556952 NOVA2Q9UNW9 492 aaKnown RBP23.75■■□□□ 1.39
SIX4-203ENST00000556952 PKP3Q9Y446 797 aa23.75■■□□□ 1.39
SIX4-203ENST00000556952 C1orf232A0A0U1RR37 186 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 UPK3BL1B0FP48 263 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 UPK3BL2E5RIL1 263 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 STX7O15400 261 aaKnown RBP23.74■■□□□ 1.39
SIX4-203ENST00000556952 EGFP01133 1207 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 CHRM1P11229 460 aaPredicted RBP23.74■■□□□ 1.39
SIX4-203ENST00000556952 ITGB7P26010 798 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 GP5P40197 560 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 CDKN3Q16667 212 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 KCTD16Q68DU8 428 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 LYSMD3Q7Z3D4 306 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 OR4K2Q8NGD2 314 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 HDAC10Q969S8 669 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 FAM129BQ96TA1 746 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 NPIPB15A6NHN6 443 aaPredicted RBP23.74■■□□□ 1.39
SIX4-203ENST00000556952 C1QTNF3-AMACRE9PGA6 284 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 H7C0S8 307 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 KRT37O76014 449 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 KRT38O76015 456 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 CYP2A6P11509 494 aaPredicted RBP23.74■■□□□ 1.39
SIX4-203ENST00000556952 TIE1P35590 1138 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 ARSDP51689 593 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 SEC13P55735 322 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 CAMK2GQ13555 558 aaPredicted RBP23.74■■□□□ 1.39
SIX4-203ENST00000556952 CCINQ13939 588 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 NEPROQ6NW34 567 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 PACS1Q6VY07 963 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 KIAA0408Q6ZU52 694 aa23.74■■□□□ 1.39
SIX4-203ENST00000556952 CYP4X1Q8N118 509 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms