RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ACSL6Q9UKU0 697 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 LUC7L2Q9Y383 392 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 PCDHGC4Q9Y5F7 938 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 PCDHGA7Q9Y5G6 932 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 LRRK1Q38SD2 2015 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 PTPRQQ9UMZ3 2332 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 A0A087X0T9 212 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 PRSS38A1L453 326 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 ERVH48-1M5A8F1 160 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 FZD6O60353 706 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 PGLSO95336 258 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 GYPCP04921 128 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 FAM228BP0C875 321 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 KRT10P13645 584 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 ARSEP51690 589 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 PEX6Q13608 980 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 HLTFQ14527 1009 aaKnown RBP eCLIP12.71□□□□□ -0.379e-12■□□□□ 10.7
HNRNPC-221ENST00000555883 ACOX1Q15067 660 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 CNGA3Q16281 694 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 HADHQ16836 314 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 CERCAMQ5T4B2 595 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 KCTD16Q68DU8 428 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 TIGD7Q6NT04 549 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 ALKBH5Q6P6C2 394 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 CRTC1Q6UUV9 634 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 USP45Q70EL2 814 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 RD3Q7Z3Z2 195 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 LUZP1Q86V48 1076 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 NLRP8Q86W28 1048 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 NDUFAF2Q8N183 169 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 KIAA1524Q8TCG1 905 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 GPBAR1Q8TDU6 330 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 MAML1Q92585 1016 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 DTD2Q96FN9 168 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 TMEM74Q96NL1 305 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 ZNF670Q9BS34 389 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 PHPT1Q9NRX4 125 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 TRNAU1APQ9NX07 287 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 UVRAGQ9P2Y5 699 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 RABGEF1Q9UJ41 708 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 DNPEPQ9ULA0 475 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 NENFQ9UMX5 172 aa12.71□□□□□ -0.37
HNRNPC-221ENST00000555883 FASNP49327 2511 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 A0A1W2PQM1 296 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 SYCE3A1L190 88 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 GOLGA6L19H0YKK7 550 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 PLD2O14939 933 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 NOBOXO60393 691 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 ZNF30P17039 623 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 LHCGRP22888 699 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 GARSP41250 739 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 CXADRP78310 365 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 RHDQ02161 417 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 GALNT2Q10471 571 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 TRAF2Q12933 501 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 PDK2Q15119 407 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 CLPPQ16740 277 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 C14orf28Q4W4Y0 310 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 ARMC12Q5T9G4 340 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 C17orf82Q86X59 251 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 TSGA13Q96PP4 275 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 LGR4Q9BXB1 951 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 FRMD8Q9BZ67 464 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 STRADBQ9C0K7 418 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 POLR1EQ9GZS1 481 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 TMEM168Q9H0V1 697 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 LRRN3Q9H3W5 708 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 SIRPGQ9P1W8 387 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 SLC17A4Q9Y2C5 497 aa12.7□□□□□ -0.38
HNRNPC-221ENST00000555883 ASXL3Q9C0F0 2248 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 CAPN8A6NHC0 703 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 NPIPB15A6NHN6 443 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 MATN3O15232 486 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 KLK10O43240 276 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 RPLP0P05388 317 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 CEACAM5P06731 702 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 PYGLP06737 847 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 CCNB1P14635 433 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 CCNCP24863 283 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 INHBCP55103 352 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 CCL7P80098 99 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 CDK3Q00526 305 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 ZFP36L1Q07352 338 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 ILF3Q12906 894 aaKnown RBP eCLIP12.69□□□□□ -0.382e-7■■■□□ 15.2
HNRNPC-221ENST00000555883 ARHGEF7Q14155 803 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 KRT81Q14533 505 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 NR1D2Q14995 579 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 CCDC122Q5T0U0 273 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 NCBP2-AS2Q69YL0 99 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 SPECC1LQ69YQ0 1117 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 ZNF765Q7L2R6 523 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 ZNF438Q7Z4V0 828 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 SPRED1Q7Z699 444 aa12.69□□□□□ -0.38
HNRNPC-221ENST00000555883 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms