RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 UCKL1Q9NWZ5 548 aa12.37□□□□□ -0.43
SYNE2-214ENST00000554928 SPO11Q9Y5K1 396 aa12.37□□□□□ -0.43
SYNE2-214ENST00000554928 SPTY2D1-AS1A0A0U1RR47 76 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SPAARA0A1B0GVQ0 90 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 A0A1W2PQ67 120 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 CFAP69A5D8W1 941 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ANKRD66B4E2M5 251 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 AURKAO14965 403 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 CBFA2T3O75081 653 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 KCNK5O95279 499 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ATXN1LP0C7T5 689 aaKnown RBP12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 CYP2A6P11509 494 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-214ENST00000554928 PSMB4P28070 264 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 RXRGP48443 463 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 NOVA1P51513 510 aaKnown RBP12.36□□□□□ -0.43
SYNE2-214ENST00000554928 STC1P52823 247 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 EPHB1P54762 984 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 CDK18Q07002 472 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 OVGP1Q12889 678 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 AGERQ15109 404 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 PPM1JQ5JR12 505 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ANKRD20A2Q5SQ80 823 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SEL1L2Q5TEA6 688 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ANKRD20A1Q5TYW2 823 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ANKRD20A3Q5VUR7 823 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 PSAPL1Q6NUJ1 521 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 USP45Q70EL2 814 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 LYSMD3Q7Z3D4 306 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ZSCAN30Q86W11 494 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 NAXDQ8IW45 347 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 RBFAQ8N0V3 343 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SLC35F6Q8N357 371 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 TAB3Q8N5C8 712 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SLC25A41Q8N5S1 370 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 FAM71DQ8N9W8 422 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 TRIM58Q8NG06 486 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SAP25Q8TEE9 199 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 PTCD2Q8WV60 388 aaKnown RBP12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SCAMP4Q969E2 229 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 NUS1Q96E22 293 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 DTD2Q96FN9 168 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 FCRL5Q96RD9 977 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 WDR24Q96S15 920 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 TMEM121Q9BTD3 319 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 LGR4Q9BXB1 951 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 GBA3Q9H227 469 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 CARD9Q9H257 536 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 ERVMER34-1Q9H9K5 563 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SMARCAL1Q9NZC9 954 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 FAM153AQ9UHL3 310 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 RSPH14Q9UHP6 348 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SHOC2Q9UQ13 582 aa12.36□□□□□ -0.43
SYNE2-214ENST00000554928 SPTBN2O15020 2390 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 MTSS1O43312 755 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 LIASO43766 372 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 PCDHGA12O60330 932 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 METTL18O95568 372 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SOD1P00441 154 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 ETS1P14921 441 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 RABIFP47224 123 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 RPL26P61254 145 aaKnown RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SNX1Q13596 522 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SPARCL1Q14515 664 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 TCEA2Q15560 299 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 OASLQ15646 514 aaKnown RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 ZNF569Q5MCW4 686 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 FAXCQ5TGI0 409 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 MICALCLQ6ZW33 695 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SLC25A45Q8N413 288 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 GLIS1Q8NBF1 620 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 BAHD1Q8TBE0 780 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SETD7Q8WTS6 366 aaKnown RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SPATA13Q96N96 652 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 LYSMD1Q96S90 227 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 VAT1Q99536 393 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 APOL2Q9BQE5 337 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 APOOQ9BUR5 198 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 ABCG8Q9H221 673 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 DNAJC28Q9NX36 388 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 TRHDEQ9UKU6 1024 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 RPL26L1Q9UNX3 145 aaKnown RBP12.35□□□□□ -0.43
SYNE2-214ENST00000554928 SPEGQ15772 3267 aa12.35□□□□□ -0.43
SYNE2-214ENST00000554928 CABIN1Q9Y6J0 2220 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 LOC285095A0A1B0GVY8 99 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 GOLGA6L9A6NEM1 432 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 TMEM202A6NGA9 273 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 CEP104O60308 925 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 NDST3O95803 873 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 AGTP01019 485 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 FGGP02679 453 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms