RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 HSPH1Q92598 858 aa12.53□□□□□ -0.4
SHMT2-214ENST00000554604 EXOC2Q96KP1 924 aa12.53□□□□□ -0.4
SHMT2-214ENST00000554604 ATP6V1G3Q96LB4 118 aa12.53□□□□□ -0.4
SHMT2-214ENST00000554604 SLC39A8Q9C0K1 460 aa12.53□□□□□ -0.4
SHMT2-214ENST00000554604 SP110Q9HB58 689 aa12.53□□□□□ -0.4
SHMT2-214ENST00000554604 MSRB2Q9Y3D2 182 aa12.53□□□□□ -0.4
SHMT2-214ENST00000554604 IGLON5A6NGN9 336 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 ZNF487B1APH4 448 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 J3KR12 359 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 TP73O15350 636 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 PRAMEF11O60813 436 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 LDOC1O95751 146 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 C1QTNF9P0C862 333 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 MYZAPP0CAP1 466 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 ABL2P42684 1182 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 RXRGP48443 463 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 HCAR3P49019 387 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 PAPOLAP51003 745 aaKnown RBP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 CLDN2P57739 230 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 ADCY2Q08462 1091 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 BNIP3Q12983 259 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 GRM3Q14832 879 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 CYTH1Q15438 398 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 SHBQ15464 509 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 OASLQ15646 514 aaKnown RBP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 ZNF771Q7L3S4 317 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 EID2Q8N6I1 236 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 PAF1Q8N7H5 531 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 KCTD6Q8NC69 237 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 OR13H1Q8NG92 308 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 FAM174AQ8TBP5 190 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 ZBTB9Q96C00 473 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 TMEM109Q9BVC6 243 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 EPB41L4BQ9H329 900 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 CWC15Q9P013 229 aaKnown RBP12.52□□□□□ -0.41
SHMT2-214ENST00000554604 LHX3Q9UBR4 397 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 DNPEPQ9ULA0 475 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 ITM2BQ9Y287 266 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 MFHAS1Q9Y4C4 1052 aa12.52□□□□□ -0.41
SHMT2-214ENST00000554604 MYLKQ15746 1914 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 FPGTO14772 594 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 SDC3O75056 442 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 PROS1P07225 676 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 ADCY8P40145 1251 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 LMAN1P49257 510 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 ARSEP51690 589 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 ITGA8P53708 1063 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 PDK2Q15119 407 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 KCTD19Q17RG1 926 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-214ENST00000554604 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 DENND2CQ68D51 928 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 Q6ZSR6 202 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 GSTA5Q7RTV2 222 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 ABI3BPQ7Z7G0 1075 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 HOOK3Q86VS8 718 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 DCP2Q8IU60 420 aaKnown RBP12.51□□□□□ -0.41
SHMT2-214ENST00000554604 RELL1Q8IUW5 271 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 LZTR1Q8N653 840 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 CNDP2Q96KP4 475 aaKnown RBP12.51□□□□□ -0.41
SHMT2-214ENST00000554604 CINPQ9BW66 212 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-214ENST00000554604 CPEB1Q9BZB8 566 aaKnown RBP12.51□□□□□ -0.41
SHMT2-214ENST00000554604 PDFQ9HBH1 243 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 PCDH9Q9HC56 1237 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 DKK3Q9UBP4 350 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
SHMT2-214ENST00000554604 GGT7Q9UJ14 662 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 ZNF148Q9UQR1 794 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 HS3ST3A1Q9Y663 406 aa12.51□□□□□ -0.41
SHMT2-214ENST00000554604 POM121BA6NF01 834 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 DNALI1O14645 258 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-214ENST00000554604 INSIG1O15503 277 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 CST8O60676 142 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-214ENST00000554604 PIGNO95427 931 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 APOC2P02655 101 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 SUOXP51687 545 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 IL10RBQ08334 325 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 ELP6Q0PNE2 266 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 DPYSQ14117 519 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 TFDP2Q14188 446 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 FGL2Q14314 439 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 KRT81Q14533 505 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 IZUMO3Q5VZ72 239 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 AFMIDQ63HM1 303 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 HIBCHQ6NVY1 386 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-214ENST00000554604 GCNT7Q6ZNI0 430 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 MAP7D3Q8IWC1 876 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 ARHGAP12Q8IWW6 846 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 ARFGAP2Q8N6H7 521 aa12.5□□□□□ -0.41
SHMT2-214ENST00000554604 NPWQ8N729 165 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms