RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 UBALD2Q8IYN6 164 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 CBARPQ8N350 705 aaPredicted RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 PPM1NQ8N819 430 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 GPR150Q8NGU9 434 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 OR2T3Q8NH03 318 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 PIP4K2CQ8TBX8 421 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 DTX3LQ8TDB6 740 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 DCAKDQ8WVC6 231 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 ATXN2LQ8WWM7 1075 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 RAB7BQ96AH8 199 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 MTBPQ96DY7 904 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 DNAJC1Q96KC8 554 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 ATP6V1G3Q96LB4 118 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 CPNE1Q99829 537 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 HDAC8Q9BY41 377 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 GPR63Q9BZJ6 419 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 CDH19Q9H159 772 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 MTG2Q9H4K7 406 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 PPANQ9NQ55 473 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 PRDM6Q9NQX0 595 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 DYRK4Q9NR20 520 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 SMYD2Q9NRG4 433 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 RAD18Q9NS91 495 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 POLR3BQ9NW08 1133 aaPredicted RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 FAM53CQ9NYF3 392 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 IL17CQ9P0M4 197 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 SENP1Q9P0U3 644 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 NFKBIL1Q9UBC1 381 aaPredicted RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 B4GALT6Q9UBX8 382 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 SLC2A6Q9UGQ3 507 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 SCML1Q9UN30 329 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 MIA3Q5JRA6 1907 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 IQANK1A0A1B0GTG1 560 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 TLDC2A0PJX2 215 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CCDC78A2IDD5 438 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 RGSL1A5PLK6 1076 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CXorf49A8MYA2 514 aaPredicted RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 POC1B-GALNT4F8VUJ3 575 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 AURKAO14965 403 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 AREL1O15033 823 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ADAM23O75077 832 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 RNF40O75150 1001 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 KLF8O95600 359 aaPredicted RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 IL1BP01584 269 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ALPIP09923 528 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ERVK-10P10266 1014 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ADRB3P13945 408 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 HOXB2P14652 356 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 TIMP2P16035 220 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CTPS1P17812 591 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 OGNP20774 298 aaKnown RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 C5AR1P21730 350 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 SLCO1A2P46721 670 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ARSDP51689 593 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 STC1P52823 247 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 SEC13P55735 322 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 STARD6P59095 220 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 DCDC1P59894 354 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 SATB1Q01826 763 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 SFSWAPQ12872 951 aaKnown RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 DNAJC3Q13217 504 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CKAP5Q14008 2032 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ARHGEF7Q14155 803 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CST6Q15828 149 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 TYSND1Q2T9J0 566 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 C2orf27AQ580R0 203 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 HSP90AA5PQ58FG0 334 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 AARS2Q5JTZ9 985 aaKnown RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 GRTP1Q5TC63 336 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 EMC10Q5UCC4 262 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 LRRC66Q68CR7 880 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ZNF776Q68DI1 518 aaPredicted RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 ZNF470Q6ECI4 717 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 MRNIPQ6NTE8 343 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 NEPROQ6NW34 567 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CRTC1Q6UUV9 634 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 PACS1Q6VY07 963 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ERN2Q76MJ5 926 aaKnown RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 TTC7BQ86TV6 843 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 MMAAQ8IVH4 418 aaKnown RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 UNC5BQ8IZJ1 945 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ZNF687Q8N1G0 1237 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 C2CD4AQ8NCU7 369 aaPredicted RBP7.65□□□□□ -1.18
TDP1-209ENST00000554180 OR4K2Q8NGD2 314 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 OR13C4Q8NGS5 318 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 OR6P1Q8NGX9 317 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 OR4L1Q8NH43 312 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 HDAC10Q969S8 669 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 PBXIP1Q96AQ6 731 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 FAM131CQ96AQ9 280 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 TLCD1Q96CP7 247 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CDKN2AIPNLQ96HQ2 116 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 TBATAQ96M53 351 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 PLEKHG4BQ96PX9 1271 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 TCF12Q99081 682 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 NELL2Q99435 816 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 CD248Q9HCU0 757 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 PCDH12Q9NPG4 1184 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 PKD2L2Q9NZM6 624 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 GGT7Q9UJ14 662 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms