RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PGM1P36871 562 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 TMPOP42166 694 aaKnown RBP3.94□□□□□ -1.78
SCFD1-210ENST00000553693 PITX1P78337 314 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-210ENST00000553693 RELQ04864 619 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-210ENST00000553693 ZNF766Q5HY98 468 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 NAA35Q5VZE5 725 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 TMEM81Q6P7N7 255 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 CPLX2Q6PUV4 134 aaKnown RBP3.94□□□□□ -1.78
SCFD1-210ENST00000553693 C19orf48Q6RUI8 117 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 LRRC8DQ7L1W4 858 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 TAOK1Q7L7X3 1001 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 NOXA1Q86UR1 476 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 SATL1Q86VE3 508 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 ZCCHC9Q8N567 271 aaKnown RBP3.94□□□□□ -1.78
SCFD1-210ENST00000553693 ELP4Q96EB1 424 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 FBXO17Q96EF6 278 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 PGLYRP2Q96PD5 576 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 SH3GL2Q99962 352 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 ESRP2Q9H6T0 727 aaKnown RBP3.94□□□□□ -1.78
SCFD1-210ENST00000553693 PLEKHA5Q9HAU0 1116 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 LRRC4Q9HBW1 653 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 MAGEE1Q9HCI5 957 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 PTPRHQ9HD43 1115 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 DDX4Q9NQI0 724 aaKnown RBP3.94□□□□□ -1.78
SCFD1-210ENST00000553693 KLHL1Q9NR64 748 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 ZFP57Q9NU63 452 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 STON1Q9Y6Q2 735 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 RIMBP3CA6NJZ7 1639 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 RIMBP3BA6NNM3 1639 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 RIMBP3Q9UFD9 1639 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 GAGE10A6NGK3 116 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 CDH1P12830 882 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 FMO5P49326 533 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 CLCN3P51790 818 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.93□□□□□ -1.78
SCFD1-210ENST00000553693 SLC20A2Q08357 652 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 PPFIA1Q13136 1202 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 NFIL3Q16649 462 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 KCNT1Q5JUK3 1230 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 RGMBQ6NW40 437 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-210ENST00000553693 SLC36A4Q6YBV0 504 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 MARK2Q7KZI7 788 aaKnown RBP3.93□□□□□ -1.78
SCFD1-210ENST00000553693 SLC26A9Q7LBE3 791 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 SLC9B2Q86UD5 537 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 ANKRD18AQ8IVF6 992 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 DMBX1Q8NFW5 382 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 CDCA5Q96FF9 252 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 MKKSQ9NPJ1 570 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-210ENST00000553693 C20orf141Q9NUB4 165 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 TINAGQ9UJW2 476 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 FBXO9Q9UK97 447 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-210ENST00000553693 HSF4Q9ULV5 492 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 WDR62O43379 1518 aa3.93□□□□□ -1.78
SCFD1-210ENST00000553693 ASPDHA6ND91 283 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 TMEM202A6NGA9 273 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 CAPN9O14815 690 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 TFP02787 698 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 MAOAP21397 527 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 MARK3P27448 753 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 GNL1P36915 607 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-210ENST00000553693 CDKN1AP38936 164 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 GABRB2P47870 512 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 CDH15P55291 814 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 GRIK3Q13003 919 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 PPP2R5BQ15173 497 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 SGO1Q5FBB7 561 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 TRNP1Q6NT89 227 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 ANKRD54Q6NXT1 300 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 SLC22A25Q6T423 547 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 KMT5CQ86Y97 462 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 CHERPQ8IWX8 916 aaKnown RBP3.92□□□□□ -1.78
SCFD1-210ENST00000553693 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 SLC35F3Q8IY50 421 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 PLD5Q8N7P1 536 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 RND1Q92730 232 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 ARPC5LQ9BPX5 153 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 HERPUD2Q9BSE4 406 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 FKRPQ9H9S5 495 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 FBRSL1Q9HCM7 1045 aaKnown RBP3.92□□□□□ -1.78
SCFD1-210ENST00000553693 RIC8AQ9NPQ8 531 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 TAAR2Q9P1P5 351 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 GAB2Q9UQC2 676 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 ZNF711Q9Y462 761 aa3.92□□□□□ -1.78
SCFD1-210ENST00000553693 ARID4BQ4LE39 1312 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-210ENST00000553693 LILRA5A6NI73 299 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 TTC36A6NLP5 189 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 EDIL3O43854 480 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 TACC1O75410 805 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 URODP06132 367 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 IFIT1P09914 478 aaKnown RBP3.91□□□□□ -1.78
SCFD1-210ENST00000553693 G6PDP11413 515 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 EIF2S3P41091 472 aaKnown RBP3.91□□□□□ -1.78
SCFD1-210ENST00000553693 CRIP2P52943 208 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-210ENST00000553693 HNRNPH2P55795 449 aaKnown RBP3.91□□□□□ -1.78
SCFD1-210ENST00000553693 GGNBP1Q5YKI7 109 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 PLA2G4FQ68DD2 849 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 TXNDC8Q6A555 127 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 METTL2BQ6P1Q9 378 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms