RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 A0A1W2PRG0 241 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 A0A1W2PS18 150 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 LILRA5A6NI73 299 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 IFITM10A6NMD0 228 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 SOCS6O14544 535 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 CLGNO14967 610 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 MID1O15344 667 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 ZNF432O94892 652 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 KDM4BO94953 1096 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 PYGLP06737 847 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 USP8P40818 1118 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 GNAQP50148 359 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 HNRNPH2P55795 449 aaKnown RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 OLIG2Q13516 323 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 CTF1Q16619 201 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 FRG2Q64ET8 278 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 LRRC8EQ6NSJ5 796 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 KCTD18Q6PI47 426 aaPredicted RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 DSTYKQ6XUX3 929 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 GSTA5Q7RTV2 222 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 CACNA2D4Q7Z3S7 1137 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 SFR1Q86XK3 245 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 SPATA6LQ8N4H0 392 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 POC1AQ8NBT0 407 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 SPATA22Q8NHS9 363 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 LMLNQ96KR4 655 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 MAP7D2Q96T17 732 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 LBHD1Q9BQE6 289 aaPredicted RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 NUF2Q9BZD4 464 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 GLIS2Q9BZE0 524 aaPredicted RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 TTYH1Q9H313 450 aaPredicted RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 MYH16Q9H6N6 1097 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 FKRPQ9H9S5 495 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 MMP25Q9NPA2 562 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 LTB4R2Q9NPC1 389 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 HINT3Q9NQE9 182 aaKnown RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 TXLNGQ9NUQ3 528 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 TMEM30AQ9NV96 361 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 TAS2R10Q9NYW0 307 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 HAO1Q9UJM8 370 aa3.3□□□□□ -1.88
VRK1-202ENST00000553683 TTC7AQ9ULT0 858 aaPredicted RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 AAR2Q9Y312 384 aaKnown RBP3.3□□□□□ -1.88
VRK1-202ENST00000553683 HNRNPCL2B2RXH8 293 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 SEC14L2O76054 403 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 TMEM63AO94886 807 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 IGKV3-20P01619 116 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 EDN2P20800 178 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 DGKAP23743 735 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 ABCD3P28288 659 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 EPHA8P29322 1005 aaPredicted RBP3.29□□□□□ -1.88
VRK1-202ENST00000553683 GGT5P36269 586 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 EEF1A1P68104 462 aaKnown RBP3.29□□□□□ -1.88
VRK1-202ENST00000553683 NEXNQ0ZGT2 675 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 TDGQ13569 410 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 DRAP1Q14919 205 aaPredicted RBP3.29□□□□□ -1.88
VRK1-202ENST00000553683 CCDC6Q16204 474 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 CCNG2Q16589 344 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 MMEL1Q495T6 779 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 KCNT1Q5JUK3 1230 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 SLC9C2Q5TAH2 1124 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 EEF1A1P5Q5VTE0 462 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 ACAD10Q6JQN1 1059 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 LCTLQ6UWM7 567 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 FOXL2NBQ6ZUU3 175 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 NR2C2APQ86WQ0 139 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 FOXRED2Q8IWF2 684 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 MUC20Q8N307 709 aaPredicted RBP3.29□□□□□ -1.88
VRK1-202ENST00000553683 CADM4Q8NFZ8 388 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 KIF1BPQ96EK5 621 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 TMEM19Q96HH6 336 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 INPP4AQ96PE3 977 aaPredicted RBP3.29□□□□□ -1.88
VRK1-202ENST00000553683 STRA6Q9BX79 667 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 HEMGNQ9BXL5 484 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 AGXT2Q9BYV1 514 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 SPRY4Q9C004 299 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 PAIP1Q9H074 479 aaKnown RBP3.29□□□□□ -1.88
VRK1-202ENST00000553683 KCNN2Q9H2S1 579 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 UBN1Q9NPG3 1134 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 KLHL1Q9NR64 748 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 UBA2Q9UBT2 640 aaPredicted RBP3.29□□□□□ -1.88
VRK1-202ENST00000553683 MALT1Q9UDY8 824 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 TINAGQ9UJW2 476 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 CRYL1Q9Y2S2 319 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 CEPT1Q9Y6K0 416 aa3.29□□□□□ -1.88
VRK1-202ENST00000553683 A0A0B4J293 547 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 PRAC2D3DTV9 90 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 ZNF587BE7ETH6 402 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 LDLRAD4O15165 306 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 AMD1P17707 334 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 PSMA4P25789 261 aaKnown RBP3.28□□□□□ -1.88
VRK1-202ENST00000553683 HOXC9P31274 260 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 BRWD1-AS2P59051 145 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 RPL7AP62424 266 aaKnown RBP3.28□□□□□ -1.88
VRK1-202ENST00000553683 GRIK2Q13002 908 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 ZBTB17Q13105 803 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 NAE1Q13564 534 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 C2orf68Q2NKX9 166 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 FAM76BQ5HYJ3 339 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 FAM69AQ5T7M9 428 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 CDC73Q6P1J9 531 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms