RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FAM129CQ86XR2 697 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 NAGSQ8N159 534 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 PAF1Q8N7H5 531 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 AGBL5Q8NDL9 886 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 CCDC112Q8NEF3 446 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 OR4D9Q8NGE8 314 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 C9orf43Q8TAL5 461 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 ECHDC3Q96DC8 303 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 NUS1Q96E22 293 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 NSMCE3Q96MG7 304 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 DDA1Q9BW61 102 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 GSDMCQ9BYG8 508 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 STK33Q9BYT3 514 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 LRRC19Q9H756 370 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 ATP13A3Q9H7F0 1226 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 CATSPERBQ9H7T0 1116 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 OCIAD1Q9NX40 245 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 SLC39A1Q9NY26 324 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 ANAPC2Q9UJX6 822 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 FZD10Q9ULW2 581 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 PLAAQ9Y263 795 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 COL12A1Q99715 3063 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 IGHV1OR21-1A0A087WYE8 117 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 BLACEA4D250 179 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 EFCAB7A8K855 629 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 TRAFD1O14545 582 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 PALMO75781 387 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 UNGP13051 313 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 OAS2P29728 719 aaKnown RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 CSTF2P33240 577 aaKnown RBP eCLIP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 GPR3P46089 330 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 CSNK1DP48730 415 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 KLK7P49862 253 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 GSCP56915 257 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 TPI1P60174 286 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 BCL2L1Q07817 233 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 CDC20Q12834 499 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 NCAPHQ15003 741 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 ZNF761Q86XN6 746 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 ZNF677Q86XU0 584 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 FAM114A1Q8IWE2 563 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 NRSN1Q8IZ57 195 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 UNC5BQ8IZJ1 945 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 FAM26EQ8N5C1 309 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 BMPERQ8N8U9 685 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 SLC45A3Q96JT2 553 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 COQ10AQ96MF6 247 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 CATSPER2Q96P56 530 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 PCDHB18PQ96TA0 734 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 SELENOOQ9BVL4 669 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 CINPQ9BW66 212 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 FRMD8Q9BZ67 464 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 SLC39A8Q9C0K1 460 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 ZMYND15Q9H091 742 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 GANQ9H2C0 597 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 GPN2Q9H9Y4 310 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 PHPT1Q9NRX4 125 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 GPATCH2LQ9NWQ4 482 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 TRNAU1APQ9NX07 287 aaKnown RBP9.08□□□□□ -0.96
SYNE2-209ENST00000553308 KCNK4Q9NYG8 393 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 B4GALT6Q9UBX8 382 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 SUFUQ9UMX1 484 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 PLEKHM1Q9Y4G2 1056 aa9.08□□□□□ -0.96
SYNE2-209ENST00000553308 LOC101059948A0A1B0GTJ6 334 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 TCRBV5S1A1TA0A578 114 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 TTC24A2A3L6 582 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-209ENST00000553308 B4E171 279 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 PDE2AO00408 941 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-209ENST00000553308 EPHB6O15197 1021 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 FGF10O15520 208 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-209ENST00000553308 ZW10O43264 779 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 NR1D1P20393 614 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 ADCY8P40145 1251 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 TSPAN7P41732 249 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 NSFP46459 744 aaKnown RBP9.07□□□□□ -0.96
SYNE2-209ENST00000553308 POLD2P49005 469 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 PAPOLAP51003 745 aaKnown RBP9.07□□□□□ -0.96
SYNE2-209ENST00000553308 NDST2P52849 883 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 RPL7AP62424 266 aaKnown RBP9.07□□□□□ -0.96
SYNE2-209ENST00000553308 CDK3Q00526 305 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 CTBSQ01459 385 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 CNGA3Q16281 694 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 DCAF12Q5T6F0 453 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 ATP1A1-AS1Q5TC04 95 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 DENND2CQ68D51 928 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 HIST2H2BCQ6DN03 193 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 DOK6Q6PKX4 331 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 TRIM72Q6ZMU5 477 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 ARHGAP36Q6ZRI8 547 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 PIAS4Q8N2W9 510 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-209ENST00000553308 MLKLQ8NB16 471 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 C3orf20Q8ND61 904 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 RTP4Q96DX8 246 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 ABHD17AQ96GS6 310 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 MCEEQ96PE7 176 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 PSMG3-AS1Q96PY0 264 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 CTRCQ99895 268 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 TEX101Q9BY14 249 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 ASPSCR1Q9BZE9 553 aa9.07□□□□□ -0.96
SYNE2-209ENST00000553308 ADAM22Q9P0K1 906 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms