RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 NXPE1Q8N323 547 aa12.44□□□□□ -0.42
SNRPF-204ENST00000552085 SLC38A3Q99624 504 aa12.44□□□□□ -0.42
SNRPF-204ENST00000552085 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
SNRPF-204ENST00000552085 TMUB1Q9BVT8 246 aa12.44□□□□□ -0.42
SNRPF-204ENST00000552085 SUDS3Q9H7L9 328 aaPredicted RBP12.44□□□□□ -0.42
SNRPF-204ENST00000552085 NTNG1Q9Y2I2 539 aa12.44□□□□□ -0.42
SNRPF-204ENST00000552085 MYO7BQ6PIF6 2116 aa12.44□□□□□ -0.42
SNRPF-204ENST00000552085 A0A1B0GUH1 482 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 SSU72P8A0A1W2PR75 194 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 ZNF185O15231 689 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
SNRPF-204ENST00000552085 XPAP23025 273 aaPredicted RBP12.43□□□□□ -0.42
SNRPF-204ENST00000552085 BRD2P25440 801 aaKnown RBP12.43□□□□□ -0.42
SNRPF-204ENST00000552085 HNRNPH3P31942 346 aaKnown RBP12.43□□□□□ -0.42
SNRPF-204ENST00000552085 PTGIRP43119 386 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 ACADSBP45954 432 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 SUOXP51687 545 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 ADAM9Q13443 819 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 PEX6Q13608 980 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 IL10RAQ13651 578 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 POLD3Q15054 466 aaPredicted RBP12.43□□□□□ -0.42
SNRPF-204ENST00000552085 ZNF517Q6ZMY9 492 aaPredicted RBP12.43□□□□□ -0.42
SNRPF-204ENST00000552085 SYVN1Q86TM6 617 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 FJX1Q86VR8 437 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 RASGRP3Q8IV61 690 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 ZNF683Q8IZ20 524 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 UBR7Q8N806 425 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 NCSTNQ92542 709 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 LGR4Q9BXB1 951 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 GPR87Q9BY21 358 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 LHX9Q9NQ69 397 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 AGPAT4Q9NRZ5 378 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 TRNAU1APQ9NX07 287 aaKnown RBP12.43□□□□□ -0.42
SNRPF-204ENST00000552085 GPR83Q9NYM4 423 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 MPP6Q9NZW5 540 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 KLHL3Q9UH77 587 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 SERTAD1Q9UHV2 236 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 LNPEPQ9UIQ6 1025 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 PCDHA7Q9UN72 937 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 COQ4Q9Y3A0 265 aa12.43□□□□□ -0.42
SNRPF-204ENST00000552085 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 DRGXA6NNA5 263 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 RHOBTB3O94955 611 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 MT-ND3P03897 115 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 HTR1EP28566 365 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 PTPN4P29074 926 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 TRIM23P36406 574 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 FASLGP48023 281 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 LIG3P49916 1009 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 RPS18P62269 152 aaKnown RBP12.42□□□□□ -0.42
SNRPF-204ENST00000552085 VWA2Q5GFL6 755 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 BNC2Q6ZN30 1099 aaPredicted RBP12.42□□□□□ -0.42
SNRPF-204ENST00000552085 ITLN2Q8WWU7 325 aaPredicted RBP12.42□□□□□ -0.42
SNRPF-204ENST00000552085 HMCESQ96FZ2 354 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 MED15Q96RN5 788 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 RUFY1Q96T51 708 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 ILKAPQ9H0C8 392 aaPredicted RBP12.42□□□□□ -0.42
SNRPF-204ENST00000552085 BRD8Q9H0E9 1235 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 THAP9Q9H5L6 903 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 C5AR2Q9P296 337 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 ST14Q9Y5Y6 855 aa12.42□□□□□ -0.42
SNRPF-204ENST00000552085 MN1Q10571 1320 aaPredicted RBP12.41□□□□□ -0.42
SNRPF-204ENST00000552085 CXorf51AA0A1B0GTR3 108 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 A6NL46 340 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
SNRPF-204ENST00000552085 TBXAS1P24557 533 aaPredicted RBP12.41□□□□□ -0.42
SNRPF-204ENST00000552085 GPD2P43304 727 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 ME1P48163 572 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 GLRBP48167 497 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 GNA12Q03113 381 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 RAD51Q06609 339 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 NME3Q13232 169 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 IL11RAQ14626 422 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 TAF5Q15542 800 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 ZNF630Q2M218 657 aaPredicted RBP12.41□□□□□ -0.42
SNRPF-204ENST00000552085 ATXN7L2Q5T6C5 722 aaPredicted RBP12.41□□□□□ -0.42
SNRPF-204ENST00000552085 TMEM270Q6UE05 265 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 LRRC31Q6UY01 552 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 KCNMB4Q86W47 210 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 DEFB106AQ8N104 65 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 GUF1Q8N442 669 aaKnown RBP12.41□□□□□ -0.42
SNRPF-204ENST00000552085 ARHGEF2Q92974 986 aaKnown RBP12.41□□□□□ -0.42
SNRPF-204ENST00000552085 WDR26Q9H7D7 661 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 SNX10Q9Y5X0 201 aa12.41□□□□□ -0.42
SNRPF-204ENST00000552085 TMEM200CA6NKL6 621 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 F5H423 210 aaPredicted RBP12.4□□□□□ -0.42
SNRPF-204ENST00000552085 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
SNRPF-204ENST00000552085 E2F3O00716 465 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 SPAG6O75602 509 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 CALCAP01258 141 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 FUCA1P04066 466 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 STSP08842 583 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 ANKRD34CP0C6C1 535 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 LPOP22079 712 aaPredicted RBP12.4□□□□□ -0.42
SNRPF-204ENST00000552085 GNPDA1P46926 289 aa12.4□□□□□ -0.42
SNRPF-204ENST00000552085 GEMIN4P57678 1058 aaKnown RBP12.4□□□□□ -0.42
SNRPF-204ENST00000552085 RPS15P62841 145 aaKnown RBP12.4□□□□□ -0.42
SNRPF-204ENST00000552085 CTBSQ01459 385 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms