RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 C16orf46Q6P387 395 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 DENND1BQ6P3S1 775 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 ENPP7Q6UWV6 458 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 ASB18Q6ZVZ8 466 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 BEND5Q7L4P6 421 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 MAMDC2Q7Z304 686 aaPredicted RBP5.42□□□□□ -1.54
HOXB3-213ENST00000552000 TFAP2DQ7Z6R9 452 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 TAF8Q7Z7C8 310 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 PIM3Q86V86 326 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 TICAM1Q8IUC6 712 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 FAM114A1Q8IWE2 563 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 CEP57L1Q8IYX8 460 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 UNC5BQ8IZJ1 945 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 RYBPQ8N488 228 aaPredicted RBP5.42□□□□□ -1.54
HOXB3-213ENST00000552000 PCDH20Q8N6Y1 951 aaKnown RBP5.42□□□□□ -1.54
HOXB3-213ENST00000552000 DCAF4L2Q8NA75 395 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 TP53I13Q8NBR0 393 aaPredicted RBP5.42□□□□□ -1.54
HOXB3-213ENST00000552000 GALNT11Q8NCW6 608 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 FAM46DQ8NEK8 389 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 KAT5Q92993 513 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 RAB7BQ96AH8 199 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 KIAA1143Q96AT1 154 aaPredicted RBP5.42□□□□□ -1.54
HOXB3-213ENST00000552000 PDXPQ96GD0 296 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 PAGE5Q96GU1 130 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 CCDC74BQ96LY2 380 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 TRIM62Q9BVG3 475 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 TM6SF2Q9BZW4 377 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 POPDC2Q9HBU9 364 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 CASS4Q9NQ75 786 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 PRDM8Q9NQV8 689 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 SLC39A1Q9NY26 324 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 FAM13BQ9NYF5 915 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 LRIT1Q9P2V4 623 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 KLQ9UEF7 1012 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 PCDHGA3Q9Y5H0 932 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 ACTL7AQ9Y615 435 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 HS3ST4Q9Y661 456 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 TLN2Q9Y4G6 2542 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 FBN3Q75N90 2809 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 RTTNQ86VV8 2226 aa5.42□□□□□ -1.54
HOXB3-213ENST00000552000 IGHV5-10-1A0A0J9YXX1 117 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 LOC101059948A0A1B0GTJ6 334 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 E5RJQ4 531 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 TOR1BO14657 336 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 AREL1O15033 823 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 GRAP2O75791 330 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ZMPSTE24O75844 475 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 TM7SF2O76062 418 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 CPNE6O95741 557 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 CLDN1O95832 211 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 GHRHP01286 108 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 TNFP01375 233 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 PNLIPP16233 465 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ITIH2P19823 946 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 TCN2P20062 427 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 MPSTP25325 297 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ALDH4A1P30038 563 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 CSTF2P33240 577 aaKnown RBP eCLIP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 GPD2P43304 727 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 RPL34P49207 117 aaKnown RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 SERPINH1P50454 418 aaKnown RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 PEX5P50542 639 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 MAZP56270 477 aaKnown RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 YWHAZP63104 245 aaKnown RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 B4GALNT1Q00973 533 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 NME3Q13232 169 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 HLTFQ14527 1009 aaKnown RBP eCLIP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 WSCD2Q2TBF2 565 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 EDRF1Q3B7T1 1238 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 C5orf22Q49AR2 442 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ZNF805Q5CZA5 627 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 RESP18Q5W5W9 173 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 SPECC1LQ69YQ0 1117 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 RETSATQ6NUM9 610 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 TCTN3Q6NUS6 607 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 OGFOD3Q6PK18 319 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 NRSN1Q8IZ57 195 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 DEFB106AQ8N104 65 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 CCDC112Q8NEF3 446 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 CPT1CQ8TCG5 803 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 CXorf40AQ8TE69 158 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 STK32AQ8WU08 396 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 OR1E3Q8WZA6 343 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 STARD8Q92502 1023 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 UBXN4Q92575 508 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ARHGEF26Q96DR7 871 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ZNF396Q96N95 335 aaPredicted RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 KLHL32Q96NJ5 620 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 HAPLN3Q96S86 360 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 WRAP53Q9BUR4 548 aaKnown RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 APOOQ9BUR5 198 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 C1QTNF7Q9BXJ2 289 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 CEP44Q9C0F1 390 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 RBSNQ9H1K0 784 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 THAP9Q9H5L6 903 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 C7orf69Q9H7B7 122 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 OCIAD1Q9NX40 245 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 MPP6Q9NZW5 540 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms