RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 SPO11Q9Y5K1 396 aa16.38■□□□□ 0.21
GCN1-209ENST00000551920 HS3ST3A1Q9Y663 406 aa16.38■□□□□ 0.21
GCN1-209ENST00000551920 TP53BP1Q12888 1972 aaPredicted RBP16.37■□□□□ 0.21
GCN1-209ENST00000551920 FPGTO14772 594 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 SLC30A4O14863 429 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 ZNF185O15231 689 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 CLDN7O95471 211 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 CER1O95813 267 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 PCCBP05166 539 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 GNG11P61952 73 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 IL9RQ01113 521 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 PTSQ03393 145 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 MPP3Q13368 585 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 CCNG2Q16589 344 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 SIRPB2Q5JXA9 342 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 FAXCQ5TGI0 409 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 IL27RAQ6UWB1 636 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 NYAP1Q6ZVC0 841 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 TECPR1Q7Z6L1 1165 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 NUS1Q96E22 293 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 IFT43Q96FT9 208 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 KLHDC7BQ96G42 594 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 FERMT1Q9BQL6 677 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 C1QTNF7Q9BXJ2 289 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 GDF3Q9NR23 364 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 DLL3Q9NYJ7 618 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 PNMA8BQ9ULN7 279 aaPredicted RBP16.37■□□□□ 0.21
GCN1-209ENST00000551920 TTC7AQ9ULT0 858 aaPredicted RBP16.37■□□□□ 0.21
GCN1-209ENST00000551920 SPTBN4Q9H254 2564 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 TMEM131Q92545 1883 aa16.37■□□□□ 0.21
GCN1-209ENST00000551920 BPTFQ12830 3046 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 C1orf232A0A0U1RR37 186 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 PSMD11O00231 422 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 TM4SF5O14894 197 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ZNF189O75820 626 aaPredicted RBP16.36■□□□□ 0.21
GCN1-209ENST00000551920 ITGAVP06756 1048 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 CD59P13987 128 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ETS1P14921 441 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ZNF30P17039 623 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 NFKBIAP25963 317 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ADRA1AP35348 466 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 RABIFP47224 123 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ARHGEF7Q14155 803 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 FZD2Q14332 565 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 INPP5AQ14642 412 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 SLC1A5Q15758 541 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 UAP1L1Q3KQV9 507 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 KCTD16Q68DU8 428 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 DRICH1Q6PGQ1 229 aaPredicted RBP16.36■□□□□ 0.21
GCN1-209ENST00000551920 ARHGEF18Q6ZSZ5 1173 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 NDUFAF2Q8N183 169 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 TAB3Q8N5C8 712 aaPredicted RBP16.36■□□□□ 0.21
GCN1-209ENST00000551920 FUBP1Q96AE4 644 aaKnown RBP16.36■□□□□ 0.21
GCN1-209ENST00000551920 PBKQ96KB5 322 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ELF4Q99607 663 aaPredicted RBP16.36■□□□□ 0.21
GCN1-209ENST00000551920 FICDQ9BVA6 458 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ZKSCAN5Q9Y2L8 839 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 ZNF711Q9Y462 761 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 OR1A2Q9Y585 309 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 KNL1Q8NG31 2342 aa16.36■□□□□ 0.21
GCN1-209ENST00000551920 A0A1B0GTQ1 180 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 AURKAO14965 403 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 USP12O75317 370 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 ANXA9O76027 345 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 SOD1P00441 154 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 AGTP01019 485 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 EPOP01588 193 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 SLC4A1P02730 911 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 MSNP26038 577 aaKnown RBP16.35■□□□□ 0.21
GCN1-209ENST00000551920 KCNJ1P48048 391 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 GEMP55040 296 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 MTM1Q13496 603 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 PDE1CQ14123 709 aaPredicted RBP16.35■□□□□ 0.21
GCN1-209ENST00000551920 P3H1Q32P28 736 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 KCTD11Q693B1 232 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 ESRP1Q6NXG1 681 aaKnown RBP16.35■□□□□ 0.21
GCN1-209ENST00000551920 TTC27Q6P3X3 843 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 SLC25A41Q8N5S1 370 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 APOL2Q9BQE5 337 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 FSD1LQ9BXM9 530 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 AP1M1Q9BXS5 423 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 ERVMER34-1Q9H9K5 563 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 TM7SF3Q9NS93 570 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 CD84Q9UIB8 345 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 KLF15Q9UIH9 416 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 SHOC2Q9UQ13 582 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 ZNF148Q9UQR1 794 aa16.35■□□□□ 0.21
GCN1-209ENST00000551920 SPTY2D1-AS1A0A0U1RR47 76 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 PGRMC1O00264 195 aaKnown RBP16.34■□□□□ 0.21
GCN1-209ENST00000551920 IFNB1P01574 187 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 ZSCAN5DPP0CG00 497 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 ZNF883P0CG24 379 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 HLA-DPA1P20036 260 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 EPHA8P29322 1005 aaPredicted RBP16.34■□□□□ 0.21
GCN1-209ENST00000551920 CCT8P50990 548 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 SPARCL1Q14515 664 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 PARP6Q2NL67 630 aa16.34■□□□□ 0.21
GCN1-209ENST00000551920 ZNF542PQ5EBM4 170 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms