RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 BLKP51451 505 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 EPHB1P54762 984 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 KIAA1024LP59773 190 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 DPTQ07507 201 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ARHGEF7Q14155 803 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 NOMO1Q15155 1222 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 PROX2Q3B8N5 592 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ZNF542PQ5EBM4 170 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 CRTC1Q6UUV9 634 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ZNF662Q6ZS27 426 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 HSD11B1LQ7Z5J1 315 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 TECPR1Q7Z6L1 1165 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 TSPAN33Q86UF1 283 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 NLRP8Q86W28 1048 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 PHACTR4Q8IZ21 702 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.88□□□□□ -0.51
YBX3-217ENST00000546164 PLA2G15Q8NCC3 412 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ZNF548Q8NEK5 533 aaPredicted RBP11.88□□□□□ -0.51
YBX3-217ENST00000546164 ATL2Q8NHH9 583 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 NUS1Q96E22 293 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 CNDP2Q96KP4 475 aaKnown RBP11.88□□□□□ -0.51
YBX3-217ENST00000546164 AGAP3Q96P47 875 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 HERPUD2Q9BSE4 406 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 DUSP23Q9BVJ7 150 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 HEMGNQ9BXL5 484 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 GLOD4Q9HC38 313 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 UCKL1Q9NWZ5 548 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 NLGN3Q9NZ94 848 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 SEPT10Q9P0V9 454 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 PNMA8BQ9ULN7 279 aaPredicted RBP11.88□□□□□ -0.51
YBX3-217ENST00000546164 CHKBQ9Y259 395 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 GOLGA4Q13439 2230 aaKnown RBP11.88□□□□□ -0.51
YBX3-217ENST00000546164 FRYQ5TBA9 3013 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ANKRD66B4E2M5 251 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 TRIM38O00635 465 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 TPP1O14773 563 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 DDX3YO15523 660 aaKnown RBP11.87□□□□□ -0.51
YBX3-217ENST00000546164 SIGLEC6O43699 453 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 KRT86O43790 486 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 TJP3O95049 919 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 ALPPL2P10696 532 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 PYGMP11217 842 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 CDK4P11802 303 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 TSHRP16473 764 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 KELP23276 732 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 CD68P34810 354 aaPredicted RBP11.87□□□□□ -0.51
YBX3-217ENST00000546164 ETV3P41162 512 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 ACADVLP49748 655 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 STC1P52823 247 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 PPARDQ03181 441 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 PTSQ03393 145 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 ILKQ13418 452 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 PTPRRQ15256 657 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 CDKN3Q16667 212 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 QPCTQ16769 361 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 LRRC66Q68CR7 880 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 PNCKQ6P2M8 343 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 Q6ZVL8 140 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 ZNF765Q7L2R6 523 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 ZC3H18Q86VM9 953 aaKnown RBP11.87□□□□□ -0.51
YBX3-217ENST00000546164 LRRC8AQ8IWT6 810 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 UBL4BQ8N7F7 174 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 PNPLA1Q8N8W4 532 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 FAM181AQ8N9Y4 354 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 LPCAT1Q8NF37 534 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 ACTL9Q8TC94 416 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 HTR3CQ8WXA8 447 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 FUBP1Q96AE4 644 aaKnown RBP11.87□□□□□ -0.51
YBX3-217ENST00000546164 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 HES6Q96HZ4 224 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 WDR92Q96MX6 357 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 SMIM14Q96QK8 99 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 RBM15Q96T37 977 aaKnown RBP eCLIP11.87□□□□□ -0.51
YBX3-217ENST00000546164 LRRC61Q9BV99 259 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 ADGRE3Q9BY15 652 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 WDR26Q9H7D7 661 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 CAAP1Q9H8G2 361 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 APOBEC3BQ9UH17 382 aaKnown RBP11.87□□□□□ -0.51
YBX3-217ENST00000546164 NEUROG3Q9Y4Z2 214 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 OR1A2Q9Y585 309 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 DGKBQ9Y6T7 804 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 KNTC1P50748 2209 aa11.87□□□□□ -0.51
YBX3-217ENST00000546164 IGF2RP11717 2491 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 AKAP13Q12802 2813 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 LMO7DNF2Z398 122 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 K7ESM1 405 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 CACNB4O00305 520 aaPredicted RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 PDE2AO00408 941 aaPredicted RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 AQP9O43315 295 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 HYAL3O43820 417 aaPredicted RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 RASGRP1O95267 797 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 FTCDO95954 541 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 TOP3BO95985 862 aaKnown RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 PYGBP11216 843 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 CKMT2P17540 419 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms