RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FGF1P05230 155 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 PIRTP0C851 137 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 CD38P28907 300 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 PAFAH1B1P43034 410 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 STAT4Q14765 748 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 ACOX1Q15067 660 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 SF3A2Q15428 464 aaKnown RBP20.5■□□□□ 0.87
HMGA2-211ENST00000545998 LAYNQ6UX15 382 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 GCNT7Q6ZNI0 430 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 HSD11B1LQ7Z5J1 315 aa20.5■□□□□ 0.87
HMGA2-211ENST00000545998 C1orf232A0A0U1RR37 186 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 H0Y8X5 98 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 PSMD3O43242 534 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 STC1P52823 247 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 CLDN2P57739 230 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 IRX4P78413 519 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 SEMA5AQ13591 1074 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 SPARCL1Q14515 664 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 LRRC14Q15048 493 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 TEAD4Q15561 434 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 KCTD19Q17RG1 926 aaPredicted RBP20.49■□□□□ 0.87
HMGA2-211ENST00000545998 WSCD2Q2TBF2 565 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 DENND2CQ68D51 928 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 ABI3BPQ7Z7G0 1075 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 IQCHQ86VS3 1027 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 PDCD7Q8N8D1 485 aaKnown RBP20.49■□□□□ 0.87
HMGA2-211ENST00000545998 MFSD2AQ8NA29 543 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 BMFQ96LC9 184 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 TBL1YQ9BQ87 522 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 APOL2Q9BQE5 337 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 NUSAP1Q9BXS6 441 aaKnown RBP20.49■□□□□ 0.87
HMGA2-211ENST00000545998 LRRC40Q9H9A6 602 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 MBNL1Q9NR56 388 aaKnown RBP20.49■□□□□ 0.87
HMGA2-211ENST00000545998 RAB6BQ9NRW1 208 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 SPO11Q9Y5K1 396 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 SCN8AQ9UQD0 1980 aa20.49■□□□□ 0.87
HMGA2-211ENST00000545998 POM121BA6NF01 834 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 VILLO15195 856 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 TUBB4AP04350 444 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 C1SP09871 688 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 ETV3P41162 512 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 BNC1Q01954 994 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 IRF4Q15306 451 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 DENND5AQ6IQ26 1287 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 PRR23CQ6ZRP0 262 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 LYSMD3Q7Z3D4 306 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 TECPR1Q7Z6L1 1165 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 LRRC45Q96CN5 670 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 EID2BQ96D98 161 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 DTD2Q96FN9 168 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 SRPK1Q96SB4 655 aaKnown RBP20.48■□□□□ 0.87
HMGA2-211ENST00000545998 DDX47Q9H0S4 455 aaKnown RBP20.48■□□□□ 0.87
HMGA2-211ENST00000545998 ARNT2Q9HBZ2 717 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 FSCN3Q9NQT6 498 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 FEZ2Q9UHY8 353 aaPredicted RBP20.48■□□□□ 0.87
HMGA2-211ENST00000545998 NEU2Q9Y3R4 380 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 ZNF711Q9Y462 761 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 TMEM131Q92545 1883 aa20.48■□□□□ 0.87
HMGA2-211ENST00000545998 A0A1B0GVT2 93 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 LNP1A1A4G5 178 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 GOLGA8CPA6NN73 597 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 ERI2A8K979 691 aaKnown RBP20.47■□□□□ 0.87
HMGA2-211ENST00000545998 FPGTO14772 594 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 USP12O75317 370 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 KRT14P02533 472 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 IGFALSP35858 605 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 OVGP1Q12889 678 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 TRIP13Q15645 432 aaPredicted RBP20.47■□□□□ 0.87
HMGA2-211ENST00000545998 KYAT3Q6YP21 454 aaKnown RBP20.47■□□□□ 0.87
HMGA2-211ENST00000545998 Q6ZVL8 140 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 RAVER1Q8IY67 606 aaKnown RBP20.47■□□□□ 0.87
HMGA2-211ENST00000545998 GPR161Q8N6U8 529 aaKnown RBP20.47■□□□□ 0.87
HMGA2-211ENST00000545998 GRK7Q8WTQ7 553 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 NUS1Q96E22 293 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 ZFYVE1Q9HBF4 777 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 KCTD5Q9NXV2 234 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 PCYOX1Q9UHG3 505 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 SHOC2Q9UQ13 582 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 CABIN1Q9Y6J0 2220 aa20.47■□□□□ 0.87
HMGA2-211ENST00000545998 A6NNZ2 444 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 KIF2AO00139 706 aaPredicted RBP20.46■□□□□ 0.87
HMGA2-211ENST00000545998 TLR4O00206 839 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 GRIK2Q13002 908 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 RFLNAQ6ZTI6 216 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 TMC3Q7Z5M5 1100 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 FAM174AQ8TBP5 190 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 CCHCR1Q8TD31 782 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 SKA1Q96BD8 255 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 TRABDQ9H4I3 376 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 ANKRD6Q9Y2G4 727 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 MYLKQ15746 1914 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 ARHGAP33O14559 1287 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 AURKAO14965 403 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 FOXD2O60548 495 aaPredicted RBP20.46■□□□□ 0.87
HMGA2-211ENST00000545998 SUN1O94901 812 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 ENGP17813 658 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 MSLNQ13421 630 aaPredicted RBP20.46■□□□□ 0.87
HMGA2-211ENST00000545998 KIF19Q2TAC6 998 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 KDM7AQ6ZMT4 941 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 PLA2G15Q8NCC3 412 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms