RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 FPGTO14772 594 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 CLPTM1O96005 669 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 ENO1P06733 434 aaKnown RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 TCN1P20061 433 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 STX5Q13190 355 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 SOWAHAQ2M3V2 549 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 AMZ1Q400G9 498 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 TMEM214Q6NUQ4 689 aaKnown RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 NEPROQ6NW34 567 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 FAM183BPQ6ZVS7 135 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 IQCF2Q8IXL9 164 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 FITM2Q8N6M3 262 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 ZNF555Q8NEP9 628 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 SUN3Q8TAQ9 357 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 SMAD5Q99717 465 aaKnown RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 TBL1YQ9BQ87 522 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 DPY30Q9C005 99 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 KLHL25Q9H0H3 589 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 GDF3Q9NR23 364 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 PIH1D1Q9NWS0 290 aaKnown RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 GMIPQ9P107 970 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 POLG2Q9UHN1 485 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 SNTNA6NMZ2 147 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 HAS3O00219 553 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 VPS4BO75351 444 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 DGKIO75912 1065 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 MYCLP1P12525 358 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 ASPAP45381 313 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 SF1Q15637 639 aaKnown RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 CHI3L2Q15782 390 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 AP5B1Q2VPB7 878 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 B3GNT6Q6ZMB0 384 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 DPP10Q8N608 796 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 SMG8Q8ND04 991 aaKnown RBP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 NAT14Q8WUY8 206 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 RAD9AQ99638 391 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 MYLK2Q9H1R3 596 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
CLIP1-218ENST00000545889 MIOSQ9NXC5 875 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 PCDHB3Q9Y5E6 796 aa8.62□□□□□ -1.03
CLIP1-218ENST00000545889 A0A1W2PRU2 124 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 MT-CO1P00395 513 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 AGTP01019 485 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 PIRTP0C851 137 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 CHRNB2P17787 502 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 RALGDSQ12967 914 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ABRQ12979 859 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 MAMLD1Q13495 774 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 RBM44Q6ZP01 1051 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ZNF280BQ86YH2 543 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ZC3H3Q8IXZ2 948 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 JOSD2Q8TAC2 188 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 TIFAQ96CG3 184 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 BTN2A3PQ96KV6 586 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ADI1Q9BV57 179 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 OSBPL2Q9H1P3 480 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 BPIFA1Q9NP55 256 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SPATA6Q9NWH7 488 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SOX13Q9UN79 622 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 LRRC42Q9Y546 428 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 KCNE2Q9Y6J6 123 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 MDM4O15151 490 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SEC22BO75396 215 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 TIE1P35590 1138 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 NUP107P57740 925 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 OCA2Q04671 838 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 FUT11Q495W5 492 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ESRP1Q6NXG1 681 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 IYDQ6PHW0 289 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 PEX5LQ8IYB4 626 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 AUTS2Q8WXX7 1259 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 MRPL48Q96GC5 212 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SERPINB12Q96P63 405 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SLC9A7Q96T83 725 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 COQ7Q99807 217 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 TTLL2Q9BWV7 592 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 DUSP16Q9BY84 665 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 PAIP1Q9H074 479 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 CATSPERZQ9NTU4 200 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 USE1Q9NZ43 259 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 VTI1BQ9UEU0 232 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 DCDC2Q9UHG0 476 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 A0A1W2PQH9 124 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 KLHL2O95198 593 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ASLP04424 464 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 NFKB1P19838 968 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 S100A1P23297 94 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 TKTP29401 623 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 RFC2P35250 354 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 BNIP1Q12981 228 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 NDUFA9Q16795 377 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 CCDC142Q17RM4 750 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 BRMS1LQ5PSV4 323 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 DEPDC1Q5TB30 811 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SLC39A5Q6ZMH5 540 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 KCNMB4Q86W47 210 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SLC22A9Q8IVM8 553 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ARID3BQ8IVW6 561 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms