RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CLPPQ16740 277 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 SGSM1Q2NKQ1 1148 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 RAB41Q5JT25 222 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 PIP5KL1Q5T9C9 394 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CYP2R1Q6VVX0 501 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ASB18Q6ZVZ8 466 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 FGD2Q7Z6J4 655 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 GKN2Q86XP6 184 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 THNSL2Q86YJ6 484 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CACNA2D3Q8IZS8 1091 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 XXYLT1Q8NBI6 393 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 RCBTB1Q8NDN9 531 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 DENND6BQ8NEG7 585 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 WFDC5Q8TCV5 224 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 DIO2Q92813 273 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ERCC4Q92889 916 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 PPP1R16AQ96I34 528 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 PPP1R13BQ96KQ4 1090 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 FCRL2Q96LA5 508 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 BMFQ96LC9 184 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 C5orf34Q96MH7 638 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 NOX5Q96PH1 765 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 LENG8Q96PV6 779 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 TAAR9Q96RI9 348 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 G6PC3Q9BUM1 346 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 SLC17A9Q9BYT1 436 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ASPSCR1Q9BZE9 553 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 IMPG2Q9BZV3 1241 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 GPN2Q9H9Y4 310 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CARS2Q9HA77 564 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CASS4Q9NQ75 786 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ABCC13Q9NSE7 274 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 TBC1D7Q9P0N9 293 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CGNQ9P2M7 1197 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 GULP1Q9UBP9 304 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 NDOR1Q9UHB4 597 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 SLCO3A1Q9UIG8 710 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 SLC25A13Q9UJS0 675 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 APPL1Q9UKG1 709 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 INTS6Q9UL03 887 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 TP53TG5Q9Y2B4 290 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 TRAF6Q9Y4K3 522 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 DOPEY2Q9Y3R5 2298 aa4.15□□□□□ -1.74
SNHG1-220ENST00000544550 A0A1W2PQM1 296 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 FRMD3A2A2Y4 597 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 KIAA1324LA8MWY0 1029 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 YY2O15391 372 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 RAD1O60671 282 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 RNF224P0DH78 156 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PRKAR1AP10644 381 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 CD8BP10966 210 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 MYCLP1P12525 358 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 LCP1P13796 627 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 CTSEP14091 401 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TSHRP16473 764 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TCN2P20062 427 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PDCP20941 246 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 RPL10P27635 214 aaKnown RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 UGT1A3P35503 534 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 CD96P40200 585 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 ETV5P41161 510 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TKTL1P51854 596 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 CASP5P51878 434 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 THOP1P52888 689 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 GPR85P60893 370 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 YPEL5P62699 121 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 NUCB2P80303 420 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 SGCGQ13326 291 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 IKZF1Q13422 519 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TRA2AQ13595 282 aaKnown RBP eCLIP4.15□□□□□ -1.752e-56■■■■□ 20.9
SNHG1-220ENST00000544550 ZXDCQ2QGD7 858 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 DEFB109BQ30KR1 87 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 MAP9Q49MG5 647 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 ACCSLQ4AC99 568 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 FAM133BQ5BKY9 247 aaKnown RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 MS4A13Q5J8X5 152 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PHF19Q5T6S3 580 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 FAXCQ5TGI0 409 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PM20D1Q6GTS8 502 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 OR6B2Q6IFH4 312 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 RFWD3Q6PCD5 774 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 ERN2Q76MJ5 926 aaKnown RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 CENPQQ7L2Z9 268 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PIM3Q86V86 326 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 CCDC65Q8IXS2 484 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TTC39CQ8N584 583 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 KYQ8NBH2 561 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TMIEQ8NEW7 156 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 JPH3Q8WXH2 748 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 ASB12Q8WXK4 309 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 KLK6Q92876 244 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 FEM1CQ96JP0 617 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 RPL10LQ96L21 214 aaKnown RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 MAGEB10Q96LZ2 347 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PRICKLE1Q96MT3 831 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TEFMQ96QE5 360 aaKnown RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 LRRC61Q9BV99 259 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 DDA1Q9BW61 102 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 SDCBP2Q9H190 292 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms