RNA–Protein interactions for RNA: ENST00000544491.2

BPTF-207, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-207ENST00000544491 PRPF39Q86UA1 669 aaKnown RBP3.38□□□□□ -1.87
BPTF-207ENST00000544491 GJC3Q8NFK1 279 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 NEK9Q8TD19 979 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 OIT3Q8WWZ8 545 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 ADAMTS14Q8WXS8 1223 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 USP6NLQ92738 828 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 MIB2Q96AX9 1013 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 WACQ9BTA9 647 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 SMARCAD1Q9H4L7 1026 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 PLEKHA4Q9H4M7 779 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 SH2D4AQ9H788 454 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 PLSCR4Q9NRQ2 329 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 SEPT11Q9NVA2 429 aaKnown RBP3.38□□□□□ -1.87
BPTF-207ENST00000544491 BABAM1Q9NWV8 329 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 PSAT1Q9Y617 370 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 A3GALT2U3KPV4 340 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 IFT140Q96RY7 1462 aa3.38□□□□□ -1.87
BPTF-207ENST00000544491 GRIN2BQ13224 1484 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 NPIPB11E5RHQ5 1161 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 IFNL4K9M1U5 179 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 WNT9BO14905 357 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 BCAT2O15382 392 aaPredicted RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 P4HA2O15460 535 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 HNRNPCL1O60812 293 aaKnown RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 MLYCDO95822 493 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 APOA4P06727 396 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 HOXC6P09630 235 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 NAGAP17050 411 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 AGAP20933 346 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 POU1F1P28069 291 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 CHATP28329 748 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 ACTN2P35609 894 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 LMAN1P49257 510 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 CLCN5P51795 746 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 NUDT6P53370 316 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 GRIK3Q13003 919 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 SOWAHAQ2M3V2 549 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 DPCR1Q3MIW9 517 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 DUSP28Q4G0W2 176 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 FSCBQ5H9T9 825 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 PRAMEF19Q5SWL8 479 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 PLEKHS1Q5SXH7 462 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 CDC73Q6P1J9 531 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 NCEH1Q6PIU2 408 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 SZRD1Q7Z422 152 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 ANKRD23Q86SG2 305 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 GPAT4Q86UL3 456 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 PALB2Q86YC2 1186 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 MB21D2Q8IYB1 491 aaPredicted RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 KIAA2013Q8IYS2 634 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 SAMD14Q8IZD0 417 aaPredicted RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 TTC39CQ8N584 583 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 FRMD1Q8N878 549 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 KCNG4Q8TDN1 519 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 ARHGEF2Q92974 986 aaKnown RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 PHF21BQ96EK2 531 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 KLHL15Q96M94 604 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 MXRA8Q9BRK3 442 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 SF3B5Q9BWJ5 86 aaKnown RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 TXLNGYQ9BZA5 131 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 USP44Q9H0E7 712 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 WDR26Q9H7D7 661 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 KAT14Q9H8E8 782 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 DDX4Q9NQI0 724 aaKnown RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 HIF1ANQ9NWT6 349 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 NFKBIL1Q9UBC1 381 aaPredicted RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 MORF4L1Q9UBU8 362 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 RPS6KA6Q9UK32 745 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 ZNF215Q9UL58 517 aaPredicted RBP3.37□□□□□ -1.87
BPTF-207ENST00000544491 MYO6Q9UM54 1294 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 NFE2L3Q9Y4A8 694 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 KCNE2Q9Y6J6 123 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 PIAS3Q9Y6X2 628 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 EVPLQ92817 2033 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 CLSPNQ9HAW4 1339 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 MTUS2Q5JR59 1369 aa3.37□□□□□ -1.87
BPTF-207ENST00000544491 SNAPC4Q5SXM2 1469 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 MYO1GB0I1T2 1018 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 EIF3CLB5ME19 914 aaKnown RBP3.36□□□□□ -1.87
BPTF-207ENST00000544491 J3KR12 359 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 TIMM23O14925 209 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 ASAP2O43150 1006 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 TGFB1I1O43294 461 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 MT-CYBP00156 380 aaPredicted RBP3.36□□□□□ -1.87
BPTF-207ENST00000544491 TFP02787 698 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 DNTTP04053 509 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 EIF2S1P05198 315 aaKnown RBP3.36□□□□□ -1.87
BPTF-207ENST00000544491 HSP90AB1P08238 724 aaKnown RBP3.36□□□□□ -1.87
BPTF-207ENST00000544491 HOXB5P09067 269 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 IRF1P10914 325 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 HOXA11P31270 313 aaPredicted RBP3.36□□□□□ -1.87
BPTF-207ENST00000544491 CPOXP36551 454 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 GABRB2P47870 512 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 AMTP48728 403 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 COMPP49747 757 aaPredicted RBP3.36□□□□□ -1.87
BPTF-207ENST00000544491 MXI1P50539 228 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 HDAC4P56524 1084 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 OLR1P78380 273 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 EGR4Q05215 589 aa3.36□□□□□ -1.87
BPTF-207ENST00000544491 CRYZQ08257 329 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms