RNA–Protein interactions for RNA: ENST00000544491.2

BPTF-207, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-207ENST00000544491 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
BPTF-207ENST00000544491 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
BPTF-207ENST00000544491 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
BPTF-207ENST00000544491 SENP3Q9H4L4 574 aaPredicted RBP14.62□□□□□ -0.07
BPTF-207ENST00000544491 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
BPTF-207ENST00000544491 FOXD1Q16676 465 aa13.56□□□□□ -0.24
BPTF-207ENST00000544491 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
BPTF-207ENST00000544491 ADRA2BP18089 450 aa13.09□□□□□ -0.31
BPTF-207ENST00000544491 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
BPTF-207ENST00000544491 MSH5O43196 834 aa12.46□□□□□ -0.41
BPTF-207ENST00000544491 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
BPTF-207ENST00000544491 KCNA4P22459 653 aa12□□□□□ -0.49
BPTF-207ENST00000544491 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
BPTF-207ENST00000544491 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
BPTF-207ENST00000544491 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
BPTF-207ENST00000544491 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
BPTF-207ENST00000544491 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
BPTF-207ENST00000544491 DMRT2Q9Y5R5 561 aa11.71□□□□□ -0.53
BPTF-207ENST00000544491 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
BPTF-207ENST00000544491 HOXD11P31277 338 aaPredicted RBP11.52□□□□□ -0.57
BPTF-207ENST00000544491 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
BPTF-207ENST00000544491 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
BPTF-207ENST00000544491 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
BPTF-207ENST00000544491 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
BPTF-207ENST00000544491 ZBTB22O15209 634 aa11.08□□□□□ -0.64
BPTF-207ENST00000544491 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
BPTF-207ENST00000544491 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
BPTF-207ENST00000544491 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
BPTF-207ENST00000544491 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
BPTF-207ENST00000544491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.671e-8■■□□□ 11.9
BPTF-207ENST00000544491 MYCNP04198 464 aaPredicted RBP10.82□□□□□ -0.68
BPTF-207ENST00000544491 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
BPTF-207ENST00000544491 RNF39Q9H2S5 420 aa10.72□□□□□ -0.69
BPTF-207ENST00000544491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
BPTF-207ENST00000544491 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
BPTF-207ENST00000544491 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
BPTF-207ENST00000544491 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
BPTF-207ENST00000544491 C1QBPQ07021 282 aaKnown RBP10.57□□□□□ -0.72
BPTF-207ENST00000544491 ATF5Q9Y2D1 282 aaPredicted RBP10.53□□□□□ -0.72
BPTF-207ENST00000544491 APLP2Q06481 763 aa10.51□□□□□ -0.73
BPTF-207ENST00000544491 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
BPTF-207ENST00000544491 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
BPTF-207ENST00000544491 CAPN15O75808 1086 aa10.33□□□□□ -0.76
BPTF-207ENST00000544491 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
BPTF-207ENST00000544491 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
BPTF-207ENST00000544491 DSG3P32926 999 aa10.21□□□□□ -0.77
BPTF-207ENST00000544491 POLA2Q14181 598 aa10.2□□□□□ -0.78
BPTF-207ENST00000544491 ABCB7O75027 752 aa10.16□□□□□ -0.78
BPTF-207ENST00000544491 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
BPTF-207ENST00000544491 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
BPTF-207ENST00000544491 FBLN2P98095 1184 aa10.02□□□□□ -0.81
BPTF-207ENST00000544491 FKBP8Q14318 412 aa9.95□□□□□ -0.82
BPTF-207ENST00000544491 SPDYE4A6NLX3 237 aa9.86□□□□□ -0.83
BPTF-207ENST00000544491 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
BPTF-207ENST00000544491 PROM2Q8N271 834 aa9.83□□□□□ -0.84
BPTF-207ENST00000544491 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
BPTF-207ENST00000544491 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
BPTF-207ENST00000544491 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
BPTF-207ENST00000544491 SSUH2Q9Y2M2 353 aa9.78□□□□□ -0.84
BPTF-207ENST00000544491 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
BPTF-207ENST00000544491 RBM42Q9BTD8 480 aaKnown RBP9.71□□□□□ -0.86
BPTF-207ENST00000544491 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
BPTF-207ENST00000544491 AKT1S1Q96B36 256 aa9.62□□□□□ -0.87
BPTF-207ENST00000544491 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
BPTF-207ENST00000544491 REM2Q8IYK8 340 aaPredicted RBP9.52□□□□□ -0.89
BPTF-207ENST00000544491 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
BPTF-207ENST00000544491 VASPP50552 380 aaPredicted RBP9.47□□□□□ -0.89
BPTF-207ENST00000544491 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
BPTF-207ENST00000544491 PITPNM1O00562 1244 aa9.42□□□□□ -0.9
BPTF-207ENST00000544491 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
BPTF-207ENST00000544491 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
BPTF-207ENST00000544491 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
BPTF-207ENST00000544491 MIER1Q8N108 512 aa9.3□□□□□ -0.92
BPTF-207ENST00000544491 PLCD3Q8N3E9 789 aa9.3□□□□□ -0.92
BPTF-207ENST00000544491 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
BPTF-207ENST00000544491 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
BPTF-207ENST00000544491 CHRDL2Q6WN34 429 aa9.26□□□□□ -0.93
BPTF-207ENST00000544491 PLEKHG5O94827 1062 aa9.24□□□□□ -0.93
BPTF-207ENST00000544491 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
BPTF-207ENST00000544491 FXR2P51116 673 aaKnown RBP eCLIP9.24□□□□□ -0.933e-7■□□□□ 9.7
BPTF-207ENST00000544491 RTN4Q9NQC3 1192 aaKnown RBP9.24□□□□□ -0.93
BPTF-207ENST00000544491 ZBTB47Q9UFB7 747 aaPredicted RBP9.23□□□□□ -0.93
BPTF-207ENST00000544491 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
BPTF-207ENST00000544491 SPOCK2Q92563 424 aa9.2□□□□□ -0.94
BPTF-207ENST00000544491 PIP4P2Q8N4L2 257 aa9.18□□□□□ -0.94
BPTF-207ENST00000544491 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
BPTF-207ENST00000544491 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.94
BPTF-207ENST00000544491 NUBP1P53384 320 aa9.13□□□□□ -0.95
BPTF-207ENST00000544491 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
BPTF-207ENST00000544491 PKD2Q13563 968 aa9.1□□□□□ -0.95
BPTF-207ENST00000544491 NPM1P06748 294 aaKnown RBP eCLIP9.09□□□□□ -0.95
BPTF-207ENST00000544491 RASEFQ8IZ41 740 aa9.05□□□□□ -0.96
BPTF-207ENST00000544491 GSE1Q14687 1217 aa9.01□□□□□ -0.97
BPTF-207ENST00000544491 FAM212AQ96EL1 285 aa9.01□□□□□ -0.97
BPTF-207ENST00000544491 CIZ1Q9ULV3 898 aaPredicted RBP8.99□□□□□ -0.97
BPTF-207ENST00000544491 TRIM41Q8WV44 630 aa8.98□□□□□ -0.97
BPTF-207ENST00000544491 ECM2O94769 699 aaPredicted RBP8.96□□□□□ -0.98
BPTF-207ENST00000544491 DCAF8Q5TAQ9 597 aa8.96□□□□□ -0.98
BPTF-207ENST00000544491 CHRM1P11229 460 aaPredicted RBP8.93□□□□□ -0.98
BPTF-207ENST00000544491 CCDC61Q9Y6R9 512 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms