RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 PADI4Q9UM07 663 aa7.81□□□□□ -1.16
NPIPB4-215ENST00000542133 ZFR2Q9UPR6 939 aaKnown RBP7.81□□□□□ -1.16
NPIPB4-215ENST00000542133 SNX8Q9Y5X2 465 aa7.81□□□□□ -1.16
NPIPB4-215ENST00000542133 MTORP42345 2549 aa7.81□□□□□ -1.16
NPIPB4-215ENST00000542133 HIVEP3Q5T1R4 2406 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ARPC4-TTLL3A0A0A6YYG9 625 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 POM121BA6NF01 834 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 PRR19A6NJB7 356 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 VSTM5A8MXK1 200 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 GOLGA6L19H0YKK7 550 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 STMND1H3BQB6 276 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 MASP2O00187 686 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 AGRPO00253 132 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 CLIC2O15247 247 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ALOX15BO15296 676 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 EIF3DO15371 548 aaKnown RBP eCLIP7.8□□□□□ -1.162e-6■■□□□ 12.9
NPIPB4-215ENST00000542133 SPINT1O43278 529 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 GCATO75600 419 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 SNUPNO95149 360 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 BMP15O95972 392 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 LIFP15018 202 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 XPAP23025 273 aaPredicted RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 PSMA4P25789 261 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ITGB7P26010 798 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 GRNP28799 593 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 HOXC12P31275 282 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 NNMTP40261 264 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 SLC11A2P49281 568 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 NUMBP49757 651 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 SEPHS1P49903 392 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ATP1A2P50993 1020 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 MAPK10P53779 464 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 SGSM1Q2NKQ1 1148 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ZACNQ401N2 412 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 VWA3BQ502W6 1294 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 RRAGBQ5VZM2 374 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 EPM2AIP1Q7L775 607 aaPredicted RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 PASD1Q8IV76 773 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 SRRM1Q8IYB3 904 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 KYQ8NBH2 561 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 GALNT6Q8NCL4 622 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ANKRD20A12PQ8NF67 263 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 TMEM159Q96B96 161 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ABHD17AQ96GS6 310 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 CATSPER2Q96P56 530 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 CPEB1Q9BZB8 566 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 UBXN6Q9BZV1 441 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 TCEAL2Q9H3H9 227 aaPredicted RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 SYNCQ9H7C4 482 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 HECAQ9UBI9 543 aaPredicted RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 SPASTQ9UBP0 616 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 CCDC39Q9UFE4 941 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 APOBEC3BQ9UH17 382 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 HS3ST3A1Q9Y663 406 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 ZNF106Q9H2Y7 1883 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 APCP25054 2843 aa7.8□□□□□ -1.16
NPIPB4-215ENST00000542133 HIVEP1P15822 2718 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 TTC24A2A3L6 582 aaPredicted RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 WIPF3A6NGB9 483 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 YJEFN3A6XGL0 299 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ZNF891A8MT65 544 aaPredicted RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 E7ENQ6 273 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 LMO7DNF2Z398 122 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 RAD51BO15315 384 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 TTI1O43156 1089 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 SART1O43290 800 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 VPS4BO75351 444 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 TIPRLO75663 272 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 IL33O95760 270 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CLDN1O95832 211 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CTSLP07711 333 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 RPSAP08865 295 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CD58P19256 250 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CSTF2P33240 577 aaKnown RBP eCLIP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 SOX5P35711 763 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 MAPK9P45984 424 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 RABIFP47224 123 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 POLD2P49005 469 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ADKP55263 362 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 C21orf58P58505 322 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CCL7P80098 99 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ZFP36L1Q07352 338 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 FAPQ12884 760 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 C1orf61Q13536 156 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 FGL2Q14314 439 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 WSCD2Q2TBF2 565 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ANKDD1AQ495B1 522 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 DCAF6Q58WW2 860 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 PRRT3Q5FWE3 981 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 MS4A13Q5J8X5 152 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 C1QL3Q5VWW1 255 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 BSPRYQ5W0U4 402 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CXorf57Q6NSI4 855 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ESRP1Q6NXG1 681 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 MSANTD2Q6P1R3 559 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 Q6ZVU0 165 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ZER1Q7Z7L7 766 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CCDC117Q8IWD4 279 aaPredicted RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 UNC45BQ8IWX7 931 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 C12orf56Q8IXR9 622 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms