RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 IPMKQ8NFU5 416 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 ZFP28Q8NHY6 868 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 RDH11Q8TC12 318 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 PSMG2Q969U7 264 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 KLHL5Q96PQ7 755 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 NPAS2Q99743 824 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 TBL1YQ9BQ87 522 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 PTTG2Q9NZH5 202 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 CHD5Q8TDI0 1954 aa17.22■□□□□ 0.35
SPIDR-227ENST00000541342 RNASEH2AO75792 299 aaKnown RBP17.21■□□□□ 0.35
SPIDR-227ENST00000541342 ADRA1AP35348 466 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 NPY2RP49146 381 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 KPNA1P52294 538 aaPredicted RBP17.21■□□□□ 0.35
SPIDR-227ENST00000541342 PRKAA1Q13131 559 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 CEP97Q8IW35 865 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
SPIDR-227ENST00000541342 AHI1Q8N157 1196 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 CFAP52Q8N1V2 620 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 SPATA6LQ8N4H0 392 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 KDM1BQ8NB78 822 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 SREK1Q8WXA9 508 aaKnown RBP17.21■□□□□ 0.35
SPIDR-227ENST00000541342 OVCA2Q8WZ82 227 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 SLC2A11Q9BYW1 496 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 NDUFA13Q9P0J0 144 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 AHSGP02765 367 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 ATP6V1B1P15313 513 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 SLC10A7Q0GE19 358 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 HERC3Q15034 1050 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPIDR-227ENST00000541342 PDZD8Q8NEN9 1154 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 HMGCLL1Q8TB92 370 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 MYRFLQ96LU7 910 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 UNKQ9C0B0 810 aaKnown RBP17.21■□□□□ 0.35
SPIDR-227ENST00000541342 SPG21Q9NZD8 308 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 CDYLQ9Y232 598 aa17.21■□□□□ 0.35
SPIDR-227ENST00000541342 KIAA0355O15063 1070 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 ANXA9O76027 345 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 APOA4P06727 396 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 ME2P23368 584 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 HECTD3Q5T447 861 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 DDX53Q86TM3 631 aaKnown RBP17.21■□□□□ 0.34
SPIDR-227ENST00000541342 LINC00523Q86TU6 105 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 SLC41A1Q8IVJ1 513 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 STON2Q8WXE9 905 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 CDK5RAP1Q96SZ6 601 aaKnown RBP17.21■□□□□ 0.34
SPIDR-227ENST00000541342 FICDQ9BVA6 458 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 RNF38Q9H0F5 515 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 RHOJQ9H4E5 214 aa17.21■□□□□ 0.34
SPIDR-227ENST00000541342 RUVBL2Q9Y230 463 aaKnown RBP17.21■□□□□ 0.34
SPIDR-227ENST00000541342 PSMD3O43242 534 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 LAG3P18627 525 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 PLD1Q13393 1074 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 RAB33AQ14088 237 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 RFTN1Q14699 578 aaPredicted RBP17.2■□□□□ 0.34
SPIDR-227ENST00000541342 IYDQ6PHW0 289 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 LGI2Q8N0V4 545 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 GALNT4Q8N4A0 578 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 MRGPRX2Q96LB1 330 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 XPR1Q9UBH6 696 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 ANKRD6Q9Y2G4 727 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 PLXNA4Q9HCM2 1894 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 C2orf78A6NCI8 922 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 PDLIM1O00151 329 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 TCN1P20061 433 aaPredicted RBP17.2■□□□□ 0.34
SPIDR-227ENST00000541342 ACVRL1P37023 503 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 HK2P52789 917 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 IHHQ14623 411 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 USP10Q14694 798 aaKnown RBP17.2■□□□□ 0.34
SPIDR-227ENST00000541342 NXNQ6DKJ4 435 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 OTOP2Q7RTS6 562 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 PDCD6IPQ8WUM4 868 aaKnown RBP17.2■□□□□ 0.34
SPIDR-227ENST00000541342 FATE1Q969F0 183 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 DTNBP1Q96EV8 351 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 MAELQ96JY0 434 aaKnown RBP17.2■□□□□ 0.34
SPIDR-227ENST00000541342 PRPF18Q99633 342 aaKnown RBP17.2■□□□□ 0.34
SPIDR-227ENST00000541342 MRPS26Q9BYN8 205 aaKnown RBP17.2■□□□□ 0.34
SPIDR-227ENST00000541342 NACA2Q9H009 215 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 GKN1Q9NS71 199 aa17.2■□□□□ 0.34
SPIDR-227ENST00000541342 ACSL4O60488 711 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 PMPCBO75439 489 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 VAPBO95292 243 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 KLKB1P03952 638 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 ZNF26P17031 533 aaPredicted RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 OR1E1P30953 314 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 MAXP61244 160 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 POLD3Q15054 466 aaPredicted RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 FAM219BQ5XKK7 198 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 LRRC8EQ6NSJ5 796 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 DENND6AQ8IWF6 608 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 WBP2Q969T9 261 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 PABPC5Q96DU9 382 aaKnown RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 HIC2Q96JB3 615 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 OMDQ99983 421 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 KIFC1Q9BW19 673 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 NT5MQ9NPB1 228 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 PLK2Q9NYY3 685 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 ATXN10Q9UBB4 475 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 OBSL1O75147 1896 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 MAGEB16A2A368 324 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms