RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 UBA3Q8TBC4 463 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 MDM1Q8TC05 714 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 TSPEARQ8WU66 669 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 NDRG1Q92597 394 aaKnown RBP6.6□□□□□ -1.35
TTR-203ENST00000541025 TFAP2CQ92754 450 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 WBP2Q969T9 261 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 SLITRK1Q96PX8 696 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 DDX23Q9BUQ8 820 aaKnown RBP6.6□□□□□ -1.35
TTR-203ENST00000541025 VPS16Q9H269 839 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 MFSD1Q9H3U5 465 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 EBF3Q9H4W6 596 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 FAM124BQ9H5Z6 455 aaPredicted RBP6.6□□□□□ -1.35
TTR-203ENST00000541025 NMUR1Q9HB89 426 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 PNPLA8Q9NP80 782 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 HPS4Q9NQG7 708 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 CCM2LQ9NUG4 571 aaPredicted RBP6.6□□□□□ -1.35
TTR-203ENST00000541025 ANO10Q9NW15 660 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 DNAJC28Q9NX36 388 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 OBP2AQ9NY56 170 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 CNTN6Q9UQ52 1028 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 SCML2Q9UQR0 700 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 CPQQ9Y646 472 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 CEP192Q8TEP8 1941 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 CACNA1IQ9P0X4 2223 aa6.6□□□□□ -1.35
TTR-203ENST00000541025 SYCE3A1L190 88 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 XPO1O14980 1071 aaKnown RBP6.59□□□□□ -1.35
TTR-203ENST00000541025 MDM4O15151 490 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 AKAP10O43572 662 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 RFPL1O75677 317 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 TBX18O95935 607 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 NUDT3O95989 172 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 DCNP07585 359 aaKnown RBP6.59□□□□□ -1.35
TTR-203ENST00000541025 PAEPP09466 180 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ATP1A3P13637 1013 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ZNF18P17022 549 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 EEF1GP26641 437 aaKnown RBP6.59□□□□□ -1.35
TTR-203ENST00000541025 PPP3CCP48454 512 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 CLCN5P51795 746 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 BCAT1P54687 386 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 SLC7A9P82251 487 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 MYL5Q02045 173 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ZNF268Q14587 947 aaPredicted RBP6.59□□□□□ -1.35
TTR-203ENST00000541025 MTF1Q14872 753 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 KLHL40Q2TBA0 621 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 BEAN1Q3B7T3 259 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ARHGAP29Q52LW3 1261 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 RAB41Q5JT25 222 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 SNX30Q5VWJ9 437 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 FAM180AQ6UWF9 173 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 LCLAT1Q6UWP7 414 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 DHX40Q8IX18 779 aaKnown RBP6.59□□□□□ -1.35
TTR-203ENST00000541025 YAF2Q8IY57 180 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 CCDC105Q8IYK2 499 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 PJA1Q8NG27 643 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ZNF480Q8WV37 535 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 OVCA2Q8WZ82 227 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 SHC3Q92529 594 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 DNASE1L2Q92874 299 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ULBP1Q9BZM6 244 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 CDH19Q9H159 772 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 LINC00597Q9H2U6 94 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 KIF9Q9HAQ2 790 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 LTB4R2Q9NPC1 389 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 TRPV5Q9NQA5 729 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 GKN1Q9NS71 199 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 COMMD8Q9NX08 183 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 EHD2Q9NZN4 543 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 DLGAP2Q9P1A6 1054 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ZNHIT2Q9UHR6 403 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 ARHGAP26Q9UNA1 814 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 WNT6Q9Y6F9 365 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 PIAS3Q9Y6X2 628 aa6.59□□□□□ -1.35
TTR-203ENST00000541025 WDR87Q6ZQQ6 2873 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 MYO18AQ92614 2054 aaKnown RBP6.58□□□□□ -1.36
TTR-203ENST00000541025 KANSL1LA0AUZ9 987 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 SPECC1L-ADORA2AF8WAN1 911 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 M0QYV0 167 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 PES1O00541 588 aaKnown RBP6.58□□□□□ -1.36
TTR-203ENST00000541025 EPHB6O15197 1021 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 PJA2O43164 708 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 TLR5O60602 858 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 MBL2P11226 248 aaPredicted RBP6.58□□□□□ -1.36
TTR-203ENST00000541025 KRT5P13647 590 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 TRIM21P19474 475 aaKnown RBP6.58□□□□□ -1.36
TTR-203ENST00000541025 RGS7P49802 495 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 TUBP50607 506 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 TKTL1P51854 596 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 COPB1P53618 953 aaKnown RBP6.58□□□□□ -1.36
TTR-203ENST00000541025 MFAP3P55082 362 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 ADIGQ0VDE8 80 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 BST2Q10589 180 aaKnown RBP6.58□□□□□ -1.36
TTR-203ENST00000541025 TCF15Q12870 199 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 PIN1Q13526 163 aaPredicted RBP6.58□□□□□ -1.36
TTR-203ENST00000541025 RUNX3Q13761 415 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 UBXN2BQ14CS0 331 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 CNGA2Q16280 664 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 MUM1Q2TAK8 710 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 HECTD3Q5T447 861 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 KLHDC7AQ5VTJ3 777 aa6.58□□□□□ -1.36
TTR-203ENST00000541025 PMF1Q6P1K2 205 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms