RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PSMD13Q9UNM6 376 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 HOXA2O43364 376 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CSH1P0DML2 217 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CSH2P0DML3 217 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 FCGR1AP12314 374 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ATP5F1P24539 256 aaPredicted RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 SOAT1P35610 550 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 PRIM2P49643 509 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 AQP4P55087 323 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF177Q13360 481 aaPredicted RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 FBXO48Q5FWF7 155 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 RAB41Q5JT25 222 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 LZICQ8WZA0 190 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 DNAJC1Q96KC8 554 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CLPBQ9H078 707 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CDH19Q9H159 772 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 A8MX80 341 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ENPP3O14638 875 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 RAMP2O60895 175 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 HGFP14210 728 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CCNB1P14635 433 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ALDH7A1P49419 539 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 PRMT2P55345 433 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 LIPMQ5VYY2 423 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ANO7Q6IWH7 933 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 TDRPQ86YL5 185 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 DSELQ8IZU8 1212 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF781Q8N8C0 355 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 LPCAT1Q8NF37 534 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 UTP15Q8TED0 518 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 C7orf26Q96N11 449 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 DPY30Q9C005 99 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ARMC7Q9H6L4 198 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CSNK1G1Q9HCP0 422 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 SPAG4Q9NPE6 437 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 TAS2R13Q9NYV9 303 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 SF3B1O75533 1304 aaKnown RBP eCLIP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 FAM149AA5PLN7 773 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 F5H5T6 163 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 TK2O00142 265 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 MAGEC1O60732 1142 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CCNFP41002 786 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CXCR3P49682 368 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CDC16Q13042 620 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 PLCL1Q15111 1095 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 SPDYE7PQ495Y7 208 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 PCID2Q5JVF3 399 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 OTUD1Q5VV17 481 aaPredicted RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CWF19L1Q69YN2 538 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 PIWIL4Q7Z3Z4 852 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 TP53INP2Q8IXH6 220 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 COLGALT2Q8IYK4 626 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ITFG1Q8TB96 612 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 FAM81AQ8TBF8 368 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 NT5C3BQ969T7 300 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 RTP4Q96DX8 246 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 HIPK3Q9H422 1215 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 WDR6Q9NNW5 1121 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 C6orf203Q9P0P8 240 aaPredicted RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 TEX264Q9Y6I9 313 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CENPFP49454 3210 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 HHLA1C9JL84 531 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 E7ESA3 106 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 TRIM38O00635 465 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PLIN3O60664 434 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PAGE1O75459 146 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 TGDSO95455 350 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 TPSB2P20231 275 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 GPR15P49685 360 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 SEMA5AQ13591 1074 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 TPSAB1Q15661 275 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 SATL1Q86VE3 508 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF567Q8N184 647 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 SERPINB11Q96P15 392 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 HGH1Q9BTY7 390 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PRKD2Q9BZL6 878 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 COMMD8Q9NX08 183 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PRKAG3Q9UGI9 489 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 DOLKQ9UPQ8 538 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 POMPQ9Y244 141 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PRRG1O14668 218 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 LIN7AO14910 233 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 YWHAQP27348 245 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 MZF1P28698 734 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 TPP2P29144 1249 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 NEK3P51956 506 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF135P52742 658 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 PRKAA2P54646 552 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 RAB10P61026 200 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 SYTL3Q4VX76 610 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 MON1AQ86VX9 555 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 BPIFB6Q8NFQ5 453 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 OSCP1Q8WVF1 389 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 FCRL2Q96LA5 508 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 VAT1Q99536 393 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 C1orf50Q9BV19 199 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms