RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 AFAP1L2Q8N4X5 818 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 NSUN5Q96P11 429 aaKnown RBP20.32■□□□□ 0.84
TMEM260-203ENST00000539559 POLR1BQ9H9Y6 1135 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 RALGAPA2Q2PPJ7 1873 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 SH3PXD2BA1X283 911 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 PNPLA4P41247 253 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 NUP107P57740 925 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 INTS6LQ5JSJ4 861 aaKnown RBP20.32■□□□□ 0.84
TMEM260-203ENST00000539559 AARS2Q5JTZ9 985 aaKnown RBP20.32■□□□□ 0.84
TMEM260-203ENST00000539559 HECTD2Q5U5R9 776 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 PATL1Q86TB9 770 aaKnown RBP20.32■□□□□ 0.84
TMEM260-203ENST00000539559 DUS3LQ96G46 650 aaKnown RBP20.32■□□□□ 0.84
TMEM260-203ENST00000539559 FCRL5Q96RD9 977 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 ARMC1Q9NVT9 282 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 MPP6Q9NZW5 540 aa20.32■□□□□ 0.84
TMEM260-203ENST00000539559 ZFC3H1O60293 1989 aaKnown RBP20.31■□□□□ 0.84
TMEM260-203ENST00000539559 A0A1B0GTL3 188 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 H3BMQ9 156 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 MSI1O43347 362 aaKnown RBP20.31■□□□□ 0.84
TMEM260-203ENST00000539559 B4GAT1O43505 415 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 MAFKO60675 156 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 TNK2Q07912 1038 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 BNIP3Q12983 259 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 PSMD5Q16401 504 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 FUT11Q495W5 492 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 UBXN11Q5T124 520 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 OGFOD2Q6N063 350 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 DDIASQ8IXT1 998 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 DNAJB14Q8TBM8 379 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 PTERQ96BW5 349 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 THAP11Q96EK4 314 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 FAR2Q96K12 515 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 COG8Q96MW5 612 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 RPF2Q9H7B2 306 aaKnown RBP20.31■□□□□ 0.84
TMEM260-203ENST00000539559 IPPQ9Y573 584 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 DNAJC15Q9Y5T4 150 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 MANSC4A6NHS7 340 aaPredicted RBP20.31■□□□□ 0.84
TMEM260-203ENST00000539559 INPP4BO15327 924 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 VARSP26640 1264 aaKnown RBP20.31■□□□□ 0.84
TMEM260-203ENST00000539559 ADRA1AP35348 466 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 ECT2LQ008S8 904 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 MAP2K5Q13163 448 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 RAB39AQ14964 217 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 UGT3A2Q3SY77 523 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 UNC50Q53HI1 259 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 RABL3Q5HYI8 236 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 MORN1Q5T089 497 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 Q6ZNX1 250 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 CAMK1DQ8IU85 385 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 OR6P1Q8NGX9 317 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 SENP8Q96LD8 212 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 NMRK2Q9NPI5 230 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 AGPAT4Q9NRZ5 378 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 FAIMQ9NVQ4 179 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 KCTD3Q9Y597 815 aa20.31■□□□□ 0.84
TMEM260-203ENST00000539559 PDCD11Q14690 1871 aaKnown RBP20.31■□□□□ 0.84
TMEM260-203ENST00000539559 FXYD1O00168 92 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PTGESO14684 152 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PIP5K1BO14986 540 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 CLOCKO15516 846 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 CACNG3O60359 315 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 ANXA9O76027 345 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 MYF6P23409 242 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 KPNA2P52292 529 aaKnown RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 TAF1CQ15572 869 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 ZNF678Q5SXM1 525 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PM20D1Q6GTS8 502 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 DHRS4L2Q6PKH6 230 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 TOP6BLQ8N6T0 577 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 HDAC10Q969S8 669 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 CNGB3Q9NQW8 809 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 NEU3Q9UQ49 428 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 H3BMM5 538 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 MOCS2O96007 188 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 LINC00032P0C843 101 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PGFP49763 221 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 ARSDP51689 593 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 AIF1P55008 147 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PTPRCAPQ14761 206 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 MAGEE2Q8TD90 523 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 VPS33AQ96AX1 596 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 MID1IP1Q9NPA3 183 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 VPS45Q9NRW7 570 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 MARCH4Q9P2E8 410 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 J3QRK9 145 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 ARPC2O15144 300 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 DYNC1LI2O43237 492 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PAMP19021 973 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 FASP25445 335 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 CASP2P42575 452 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 WNT3AP56704 352 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 CYP51A1Q16850 503 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 SLC36A3Q495N2 470 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PAN2Q504Q3 1202 aaKnown RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PRAMEF19Q5SWL8 479 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 DCLRE1AQ6PJP8 1040 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 ADGRG5Q8IZF4 528 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 PCYOX1LQ8NBM8 494 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 SMG8Q8ND04 991 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms