RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LINC00523Q86TU6 105 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 KBTBD6Q86V97 674 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 SLC25A41Q8N5S1 370 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 DNAAF3Q8N9W5 541 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 C1QTNF1Q9BXJ1 281 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 ROPN1BQ9BZX4 212 aaPredicted RBP17.27■□□□□ 0.36
CLN6-202ENST00000538696 ROPN1Q9HAT0 212 aaPredicted RBP17.27■□□□□ 0.36
CLN6-202ENST00000538696 PCDH12Q9NPG4 1184 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 FBXO4Q9UKT5 387 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 FZD4Q9ULV1 537 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 PHTF1Q9UMS5 762 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 CYP8B1Q9UNU6 501 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 RPL26L1Q9UNX3 145 aaKnown RBP17.27■□□□□ 0.36
CLN6-202ENST00000538696 ITM2BQ9Y287 266 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 DOCK9Q9BZ29 2069 aa17.27■□□□□ 0.36
CLN6-202ENST00000538696 EXOC1LA0A1B0GW35 172 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 TCRBV9S1A1TA0A576 114 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 CAPN8A6NHC0 703 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 SLC7A4O43246 635 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 SPAG6O75602 509 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 IVLP07476 585 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 ALPIP09923 528 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 TPH1P17752 444 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 CTPS1P17812 591 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 PGAM1P18669 254 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 HLA-DPA1P20036 260 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 GCAP28676 217 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 EPHB1P54762 984 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 TAS2R38P59533 333 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 CDH17Q12864 832 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 PTPRRQ15256 657 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 SLC1A5Q15758 541 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 CERCAMQ5T4B2 595 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 KCTD16Q68DU8 428 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 CASC4Q6P4E1 433 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 FAM124AQ86V42 546 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 RLN3Q8WXF3 142 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 ATP6V1G3Q96LB4 118 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 MCCC1Q96RQ3 725 aaPredicted RBP17.26■□□□□ 0.35
CLN6-202ENST00000538696 CCDC77Q9BR77 488 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 ADGRE3Q9BY15 652 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 ACSS3Q9H6R3 686 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 CTNNAL1Q9UBT7 734 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 GGT7Q9UJ14 662 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 NCKAP1Q9Y2A7 1128 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 PPIL1Q9Y3C6 166 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 PLXNA2O75051 1894 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 FANCMQ8IYD8 2048 aa17.26■□□□□ 0.35
CLN6-202ENST00000538696 IGHV1OR15-9A0A0B4J2B8 117 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 CCDC163A0A0D9SF12 145 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 A0A0J9YYE9 177 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 ANKRD66B4E2M5 251 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 POC1B-GALNT4F8VUJ3 575 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 AREL1O15033 823 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 POLR3GO15318 223 aaPredicted RBP17.25■□□□□ 0.35
CLN6-202ENST00000538696 PLRG1O43660 514 aaKnown RBP17.25■□□□□ 0.35
CLN6-202ENST00000538696 ZNF217O75362 1048 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 TRBC1P01850 177 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 FGF1P05230 155 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 GSTA2P09210 222 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 XPAP23025 273 aaPredicted RBP17.25■□□□□ 0.35
CLN6-202ENST00000538696 NPY2RP49146 381 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 ADPRHP54922 357 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 POLR2LP62875 67 aaKnown RBP17.25■□□□□ 0.35
CLN6-202ENST00000538696 SEMG2Q02383 582 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 SFSWAPQ12872 951 aaKnown RBP17.25■□□□□ 0.35
CLN6-202ENST00000538696 RALGDSQ12967 914 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 MAP7D1Q3KQU3 841 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 CROCCP2Q86T23 111 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 TTC7BQ86TV6 843 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 WDR5BQ86VZ2 330 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 FRMD1Q8N878 549 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 RAB7BQ96AH8 199 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 RMDN1Q96DB5 314 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 LRFN3Q9BTN0 628 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 BFARQ9NZS9 450 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 B4GALT6Q9UBX8 382 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 FADS3Q9Y5Q0 445 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 TRPM6Q9BX84 2022 aa17.25■□□□□ 0.35
CLN6-202ENST00000538696 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
CLN6-202ENST00000538696 NPIPB15A6NHN6 443 aaPredicted RBP17.24■□□□□ 0.35
CLN6-202ENST00000538696 HMGB1P1B2RPK0 211 aaPredicted RBP17.24■□□□□ 0.35
CLN6-202ENST00000538696 RGS16O15492 202 aaPredicted RBP17.24■□□□□ 0.35
CLN6-202ENST00000538696 PIAS1O75925 651 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 C1QAP02745 245 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 STX2P32856 288 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 ACSL1P33121 698 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 MMP12P39900 470 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 SUOXP51687 545 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 ANGPT1Q15389 498 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 SKIDA1Q1XH10 827 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 KLHL38Q2WGJ6 581 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 ERAP2Q6P179 960 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 TRMT10BQ6PF06 316 aaKnown RBP17.24■□□□□ 0.35
CLN6-202ENST00000538696 CES3Q6UWW8 571 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 USP45Q70EL2 814 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 DPPA4Q7L190 304 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 FAM160A2Q8N612 972 aaPredicted RBP17.24■□□□□ 0.35
CLN6-202ENST00000538696 GSDMBQ8TAX9 411 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 TLCD1Q96CP7 247 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms